HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8sy1

System information

Experimental technique X-ray
Experimental resolution 1.76
System mass 21.09 kDa
Deposition year 2023
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 8sy1
Reference Dantsu Yuliya, Zhang Ying, Zhang Wen. . Insight into the structures of unusual base pairs in RNA complexes containing a primer/template/adenosine ligand RSC Chemical Biology
Equivalence Class NR_all_11108.3
BGSU version: 4.48

Compound WZW
Residue . / 101
Chain E / B
Non-redundant True
Interacting RNA chains A/A, B/B
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/A: synthetic construct, B/B: synthetic construct
RNA family global synthetic construct
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd

Compound WZW
Residue . / 102
Chain F / B
Non-redundant True
Interacting RNA chains A/A, B/B
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/A: synthetic construct, B/B: synthetic construct
RNA family global synthetic construct
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd

Compound WZW
Residue . / 101
Chain G / C
Non-redundant True
Interacting RNA chains D/D, C/C
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains C/C: synthetic construct, D/D: synthetic construct
RNA family global synthetic construct
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd

Compound WZW
Residue . / 101
Chain H / D
Non-redundant True
Interacting RNA chains D/D, C/C
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains C/C: synthetic construct, D/D: synthetic construct
RNA family global synthetic construct
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd