HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8sxl

System information

Experimental technique X-ray
Experimental resolution 1.90
System mass 10.01 kDa
Deposition year 2023
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 8sxl
Reference Dantsu Yuliya, Zhang Ying, Zhang Wen. . Insight into the structures of unusual base pairs in RNA complexes containing a primer/template/adenosine ligand RSC Chemical Biology

Compound AMP
Residue . / 101
Chain C / A
Non-redundant True
Interacting RNA chains A/A, B/B
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound AMP
Residue . / 101
Chain D / B
Non-redundant True
Interacting RNA chains A/A, B/B
Volume 50.76 Å3
Hydrophobicity 0.667
Hydrophilicity 0.857
Buriedness 0.561
Don/acc character 3.799
SiteScore 0.606
D Score 0.564

Compound AMP
Residue . / 102
Chain E / B
Non-redundant True
Interacting RNA chains A/A, B/B
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -