HARIBOSS - RNA-SM complexes list

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Self-complimentary RNA 15mer binding with GMP monomers

SM: 5GP 5GP 5GP 5GP

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Structure-function insights reveal the human ribosome as a cancer target for antibiotics

SM: 3HE

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Structure of bacterial 30S-IF1-IF2-IF3-mRNA-tRNA translation pre-initiation complex(state-III)

SM: FME

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Solution NMR structure of the GTP binding Class II RNA aptamer-ligand-complex containing a protonated adenine nucleotide with a highly shifted pKa.

SM: GTP

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Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)

SM: GNP

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Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B

SM: GDP

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Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.

SM: GCP

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Nonstop ribosomal complex bound with Dom34 and Hbs1

SM: GNP

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Crystal structure of Agelastatin A bound to the 80S ribosome

SM: 7MB 7MB

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Crystal structure of geneticin (G418) bound to the yeast 80S ribosome

SM: GET GET GET GET GET GET GET GET GET GET GET GET GET GET GET GET GET GET GET GET GET

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Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)

SM: 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ

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Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA

SM: 8UZ 8UZ 8UZ 8UZ

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Crystal structure of Paromomycin bound to the yeast 80S ribosome

SM: PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR

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Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome

SM: 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ 8UZ

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The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02

SM: 95H EPE

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Crystal structures of Cy3 cyanine fluorophores stacked onto the end of double-stranded RNA

SM: 96T

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The complete structure of the Mycobacterium smegmatis 70S ribosome

SM: PHE

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iSpinach aptamer

SM: 1TU SPM

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Crystal structure of Gentamicin bound to the yeast 80S ribosome

SM: LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL LLL

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Mutant T252A of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucyl-adenylate analogue in the aminoacylation conformation

SM: LSS LSS

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Quaternary complex of mutant T252A of E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformation

SM: LSS LSS

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Quaternary complex of mutant T252A of E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of leucine in the aminoacylation conformation

SM: LSS LSS

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Crystal structure of haemanthamine bound to the 80S ribosome

SM: HN8 HN8

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Quaternary complex of wild type E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformation

SM: LSS LSS

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Elongation factor G-ribosome complex captures in the absence of inhibitors.

SM: GDP

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Structure of a guanidine-I riboswitch from S. acidophilus

SM: SPK

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Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome

SM: 7AL 7AL

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Methicillin sensitive Staphylococcus aureus 70S ribosome

SM: PAR

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Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro

SM: PHE PHE SPS SPS

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RNA primer-template complex with guanosine dinucleotide ligand G(5')pp(5')G

SM: 86S 86S

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RNA primer-template complex with guanosine dinucleotide ligand G(5')ppp(5')G

SM: GP3 GP3

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RNA primer-template complex with guanosine dinucleotide G(5')pppp(5')G ligand

SM: 86P 86P 86P 86P

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Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2ntRNA in complex with Rifampin

SM: RFP

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Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 3nt RNA in complex with Rifampin

SM: RFP

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Crystal structure of HCV NS5B genotype 2A JFH-1 isolate with S15G E86Q E87Q C223H V321I mutations and Delta8 neta hairpoin loop deletion in complex with GS-639476 (diphsohate version of GS-9813), Mn2+ and symmetrical primer template 5'-AUAAAUUU

SM: 8B4

5umd

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Structure of the Plasmodium falciparum 80S ribosome bound to the antimalarial drug mefloquine

SM: YMZ YMZ

5ux3

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RNA hairpin structure containing 2-MeImpG monomer analogue and 2-MeImp-oligomer analogue

SM: 8OS

5uyl

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70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)

SM: FME

5uym

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70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)

SM: FME

5uyp

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70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)

SM: FME

5uyq

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70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)

SM: FME

5v0h

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RNA duplex with 2-MeImpG analogue bound-one binding site

SM: 8OS 8OS

5v0j

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RNA duplex with 2-MeImpG analogue bound-2 binding sites

SM: 8OS 8OS 8OS 8OS

5v0k

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RNA duplex with 2-MeImpG analogue bound-3 binding sites

SM: 8OS 8OS

5v0o

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RNA hairpin structure containing 2-MeImpG analogue bound

SM: 8OS

5v1l

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Structure of S-GNA dodecamer

SM: SPM

5v3f

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Co-crystal structure of the fluorogenic RNA Mango

SM: 74G 74G

5v7q

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Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analog

SM: 917

5v8i

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Thermus thermophilus 70S ribosome lacking ribosomal protein uS17

SM: ARG ARG

5v9z

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RNA hairpin structure containing 2-MeImpG analogue bound

SM: 8OS

5vcf

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RNA hairpin structure containing tetraloop/receptor motif, complexed with 2-MeImpG analogue

SM: 8OS

5vci

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RNA hairpin structure containing tetraloop/receptor motif, complexed with 2-MeImpG analogue

SM: 8OS

5vj9

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Guanidine-II riboswitch P2 hairpin dimer from Pseudomonas aeruginosa

SM: SPM SPM SPM SPM SPM

5vjb

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Guanidine-II riboswitch P2 hairpin dimer with 5-bromoU substitution from Pseudomonas aeruginosa

SM: SPM SPM SPM SPM

5vp2

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Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution

SM: M2D M2D