HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8auv

System information

Experimental technique Electron Microscopy
Experimental resolution 2.38
System mass 1221.47 kDa
Deposition year 2022
Molecule type RNA/Protein
# RNA entities 1
Organism Nicotiana
RCSB PDB Entry 8auv
Reference Smirnova Julia, Loerke Justus, Kleinau Gunnar, Schmidt Andrea, Bürger Jörg, Meyer Etienne H., Mielke Thorsten, Scheerer Patrick, Bock Ralph, Spahn Christian M. T., Zoschke Reimo. . Structure of the actively translating plant 80S ribosome at 2.2 Å resolution Nature Plants

Compound SPM
Residue . / 2016
Chain UE / h
Non-redundant True
Interacting RNA chains C/h
Volume 520.67 Å3
Hydrophobicity 0.058
Hydrophilicity 1.360
Buriedness 0.856
Don/acc character 1.167
SiteScore 0.844
D Score 1.010

Compound SPM
Residue . / 2017
Chain VE / h
Non-redundant True
Interacting RNA chains C/h
Volume 641.07 Å3
Hydrophobicity 0.363
Hydrophilicity 1.023
Buriedness 0.789
Don/acc character 3.154
SiteScore 1.214
D Score 1.080

Compound SPM
Residue . / 2018
Chain WE / h
Non-redundant True
Interacting RNA chains C/h
Volume 796.79 Å3
Hydrophobicity 0.238
Hydrophilicity 1.273
Buriedness 0.811
Don/acc character 1.759
SiteScore 1.225
D Score 1.011