HARIBOSS - RNA-SM complexes list

Select this complex

Crystal structure of THF riboswitch, bound with THF

Select this complex

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA lysine 3 (tRNALys3) bound to an mRNA with an AAA-codon in the A-site and Paromomycin

SM: PAR

3t1y

Select this complex

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA Lysine 3 (TRNALYS3) bound to an mRNA with an AAG-codon in the A-site and paromomycin

SM: PAR

3td1

Select this complex

Crystal structure of the bacterial A1408G-mutant and the protozoa cytoplasmic ribosomal decoding site in complex with geneticin

SM: GET GET

3tzr

Select this complex

Structure of a Riboswitch-like RNA-ligand complex from the Hepatitis C Virus Internal Ribosome Entry Site

SM: SS0

3v71

Select this complex

Crystal structure of PUF-6 in complex with 5BE13 RNA

SM: EPE

3v7e

Select this complex

Crystal structure of YbxF bound to the SAM-I riboswitch aptamer

SM: SAM SAM

3vnu

Select this complex

Complex structure of viral RNA polymerase I

SM: ATP

3vnv

Select this complex

Complex structure of viral RNA polymerase II

SM: CH1

3wfr

Select this complex

tRNA processing enzyme complex 2

SM: CTP CTP CTP CTP

3wqy

Select this complex

Crystal structure of Archaeoglobus fulgidus alanyl-tRNA synthetase in complex with wild-type tRNA(Ala) having G3.U70

SM: A5A

3wru

Select this complex

Crystal structure of the bacterial ribosomal decoding site in complex with synthetic aminoglycoside with F-HABA group

SM: SJP SJP

3zgz

Select this complex

Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and toxic moiety from agrocin 84 (TM84) in aminoacylation-like conformation

SM: 84T 84T

4a3j

Select this complex

RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid and soaked with GMPCPP

SM: G2P

4aob

Select this complex

SAM-I riboswitch containing the T. solenopsae Kt-23 in complex with S- adenosyl methionine

SM: SAM

4aqy

Select this complex

Structure of ribosome-apramycin complexes

SM: AM2 AM2 AM2 AM2 AM2

4b3m

Select this complex

Crystal structure of the 30S ribosome in complex with compound 1

SM: ON0

4b3r

Select this complex

Crystal structure of the 30S ribosome in complex with compound 30

SM: M5Z

4b3s

Select this complex

Crystal structure of the 30S ribosome in complex with compound 37

SM: RPO

4b3t

Select this complex

Crystal structure of the 30S ribosome in complex with compound 39

SM: 3TS

4b5r

Select this complex

SAM-I riboswitch bearing the H. marismortui K-t-7

SM: SAM

4bwm

Select this complex

KlenTaq mutant in complex with a RNA/DNA hybrid

SM: DCT

4cqn

Select this complex

Crystal structure of the E.coli LeuRS-tRNA complex with the non- cognate isoleucyl adenylate analogue

SM: ILA ILA

4dr2

Select this complex

Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with multiple copies of paromomycin molecules bound

SM: PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR

4dr3

Select this complex

Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with streptomycin bound

SM: SRY

4dr4

Select this complex

Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, cognate transfer RNA anticodon stem-loop and multiple copies of paromomycin molecules bound

SM: PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR

4dr5

Select this complex

Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, crystallographically disordered cognate transfer RNA anticodon stem-loop and streptomycin bound

SM: SRY

4dr6

Select this complex

Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, near-cognate transfer RNA anticodon stem-loop mismatched at the first codon position and streptomycin bound

SM: SRY

4dr7

Select this complex

Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, crystallographically disordered near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position, and streptomycin bound

SM: SRY

4duz

Select this complex

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U13C, bound with streptomycin

SM: SRY

4dv1

Select this complex

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U20G, bound with streptomycin

SM: SRY

4dv3

Select this complex

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A, bound with streptomycin

SM: SRY

4dv5

Select this complex

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A914G, bound with streptomycin

SM: SRY

4dv7

Select this complex

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A915G, bound with streptomycin

SM: SRY

4e8k

Select this complex

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and a non-hydrolyzed oligonucleotide substrate

SM: EPE EPE EPE EPE EPE SPM

4e8m

Select this complex

Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Mg2+

SM: EPE EPE EPE EPE EPE SPM SPM

4e8n

Select this complex

Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of NH4+ and Mg2+

SM: EPE EPE SPM

4e8p

Select this complex

Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Rb+ and Mg2+

SM: EPE EPE EPE EPE SPM

4e8q

Select this complex

Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Tl+ and Mg2+

SM: EPE EPE EPE SPM

4e8r

Select this complex

Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Cs+ and Mg2+

SM: EPE EPE EPE EPE

4e8t

Select this complex

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and an oligonucleotide fragment substrate (low energy dataset)

SM: EPE EPE EPE EPE EPE SPM SPM

4e8v

Select this complex

Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Ba2+

SM: EPE EPE EPE EPE

4f8u

Select this complex

Crystal structure of the bacterial ribosomal decoding site in complex with sisomicin (C2 form)

SM: SIS SIS

4f8v

Select this complex

Crystal structure of the bacterial ribosomal decoding site in complex with sisomicin (P21212 form)

SM: SIS SIS

4faq

Select this complex

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and 5'-exon

SM: EPE EPE EPE EPE EPE SPM SPM

4far

Select this complex

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exon

SM: EPE EPE EPE SPM SPM

4fau

Select this complex

Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+ and 5'-exon

SM: EPE EPE EPE SPM

4faw

Select this complex

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and a hydrolyzed oligonucleotide fragment

SM: EPE EPE SPM

4fax

Select this complex

Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Na+ and Mg2+

SM: EPE EPE EPE

4fb0

Select this complex

Structure of Oceanobacillus iheyensis group II intron C377G mutant in a ligand-free state in the presence of K+ and Mg2+

SM: EPE EPE EPE EPE SPM

4fwt

Select this complex

Complex structure of viral RNA polymerase form III

SM: GTP

4gkj

Select this complex

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human mitochondrial anticodon stem loop (ASL) of transfer RNA Methionine (TRNAMET) bound to an mRNA with an AUG-codon in the A-site and paromomycin.

SM: PAR

4gkk

Select this complex

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human mitochondrial anticodon stem loop (ASL) of transfer RNA Methionine (TRNAMET) bound to an mRNA with an AUA-codon in the A-site and paromomycin

SM: PAR

4gpw

Select this complex

Crystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P21212 form)

SM: 6HS 6HS

4gpx

Select this complex

Crystal structure of the protozoal cytoplasmic ribosomal decoding site in complex with 6'-hydroxysisomicin (P212121 form)

SM: 6HS 6HS

4gpy

Select this complex

Crystal structure of the bacterial ribosomal decoding site in complex with 6'-hydroxysisomicin

SM: 6HS 6HS

4io9

Select this complex

Crystal structure of compound 4d bound to large ribosomal subunit (50S) from Deinococcus radiodurans

SM: 1F2

4ioa

Select this complex

Crystal structure of compound 4e bound to large ribosomal subunit (50S) from Deinococcus radiodurans

SM: 1F3

4ioc

Select this complex

Crystal structure of compound 4f bound to large ribosomal subunit (50S) from Deinococcus radiodurans

SM: 1F4

4jf2

Select this complex

Structure of a class II preQ1 riboswitch reveals ligand recognition by a new fold

SM: PRF