HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3zgz

System information

Experimental technique X-ray
Experimental resolution 2.40
System mass 257.05 kDa
Deposition year 2012
Molecule type RNA/Protein
# RNA entities 1
Organism Escherichia
RCSB PDB Entry 3zgz
Reference Chopra Shaileja, Palencia Andrés, Virus Cornelia, Tripathy Ashutosh, Temple Brenda R., Velazquez-Campoy Adrian, Cusack Stephen, Reader John S.. . Plant tumour biocontrol agent employs a tRNA-dependent mechanism to inhibit leucyl-tRNA synthetase Nature Communications
Equivalence Class NR_all_11709.4
BGSU version: 4.48

Compound 84T
Residue . / 1862
Chain F / A
Non-redundant True
Interacting RNA chains B/B
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains B/B: tRNA
RNA family global tRNA
Volume 264.11 Å3
Hydrophobicity 1.057
Hydrophilicity 1.398
Buriedness 0.959
Don/acc character 0.601
SiteScore 1.174
D Score 1.059
Kd

Compound 84T
Residue . / 1862
Chain M / D
Non-redundant True
Interacting RNA chains D/E
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains D/E: tRNA
RNA family global tRNA
Volume 269.26 Å3
Hydrophobicity 1.156
Hydrophilicity 1.332
Buriedness 0.961
Don/acc character 0.659
SiteScore 1.176
D Score 1.082
Kd