HARIBOSS - RNA-SM complexes list

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70S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

SM: CLM

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Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)

SM: AM2 AM2 AM2 AM2

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Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)

SM: AM2 AM2 AM2 GDP

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Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)

SM: AM2 AM2 AM2 AM2

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Structure of the Candida albicans 80S ribosome in complex with anisomycin

SM: ANM

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Structure of the Candida albicans 80S ribosome in complex with blasticidin s

SM: BLS

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Human mitochondrial ribosome at 2.2 A resolution (bound to partly built tRNAs and mRNA)

SM: NAD SPM

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Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution

SM: NAD SPM

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Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution

SM: NAD SPM

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Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MTI-tripeptidyl-tRNA analog ACCA-ITM at 2.40A resolution

SM: ARG ARG

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Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution

SM: ARG ARG

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Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolution

SM: ARG ARG

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Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MTI-tripeptidyl-tRNA analog ACCA-ITM, and chloramphenicol at 2.50A resolution

SM: ARG ARG CLM CLM

7rqe

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Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MAI-tripeptidyl-tRNA analog ACCA-IAM, and chloramphenicol at 2.40A resolution

SM: ARG ARG CLM CLM

7rwr

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An RNA aptamer that decreases flavin redox potential

SM: FMN

7ryf

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A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S

SM: 80P 80P 80P

7ryg

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A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

SM: 80P 80P 80P

7ryh

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A. baumannii Ribosome-TP-6076 complex: Empty 70S

SM: 80P 80P 80P

7s1h

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Wild-type Escherichia coli ribosome with antibiotic linezolid

SM: ZLD

7s1j

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Wild-type Escherichia coli ribosome with antibiotic radezolid

SM: RD8

7szu

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Crystal structure of Pepper RNA aptamer in complex with HBC ligand and Fab BL3-6

SM: J8F

7td7

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Crystal structure of an E. coli thiM riboswitch bound to thiamine, manganese ions

SM: VIB

7tda

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Crystal structure of the E. coli thiM riboswitch in complex with thiamine pyrophosphate, manganese ions

SM: TPP

7tdb

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Crystal structure of the E. coli thiM riboswitch in complex with thiamine bisphosphonate, manganese ions

SM: GMI

7tdc

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Crystal structure of the E. coli thiM riboswitch in complex with thiamine bisphosphonate, calcium ions

SM: GMI

7tql

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CryoEM structure of the human 40S small ribosomal subunit in complex with translation initiation factors eIF1A and eIF5B.

SM: 5GP

7tzr

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Crystal structure of the E. coli thiM riboswitch bound to N-methyl-1-(quinoxalin-6-yl)methanamine (compound 16)

SM: KWU KWU

7tzt

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Crystal structure of the E. coli thiM riboswitch in complex with N1,N1-dimethyl-N2-(quinoxalin-6-ylmethyl)ethane-1,2-diamine (linked compound 37)

SM: KXC

7tzu

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Crystal structure of the E. coli thiM riboswitch bound to 1-(4-(piperazin-1-yl)pyridin-3-yl)-N-(quinoxalin-6-ylmethyl)methanamine (linked compound 38)

SM: KWL

7u0y

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Crystal structure of Pepper RNA aptamer in complex with HBC599 ligand and Fab BL3-6

SM: KY6

7u2i

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Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution

SM: CLM CLM

7u87

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Product of 13mer primer with activated G monomer diastereomer 1

SM: LXI LXI

7u88

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Product of 13mer primer with activated G monomer diastereomer 2

SM: LXI LXI

7u89

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Product of 14mer primer with activated G monomer diastereomer 1

SM: LXI LXI

7u8a

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Product of 14mer primer with activated G monomer diastereomer 2

SM: LXI LXI

7u8b

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Product of 14mer primer with activated asymmetric GA dimer diastereomer 1

SM: LXR

7ucj

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Mammalian 80S translation initiation complex with mRNA and Harringtonine

SM: MQ6

7uck

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80S translation initiation complex with ac4c(-1) mRNA and Harringtonine

SM: MQ6

7uoo

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Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state

SM: B3P B3P B3P GTP

7uqb

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Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4

SM: B3P B3P B3P GDP

7uqz

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Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain

SM: B3P B3P B3P GDP

7uvy

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A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA

SM: OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY

7uvz

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A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA

SM: OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY

7uw1

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A. baumannii 70S ribosome-Streptothricin-D complex

SM: OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY

7v08

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Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain

SM: B3P B3P B3P GDP

7wib

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The THF-II riboswitch bound to THF

SM: THG

7wif

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The THF-II riboswitch bound to H4B

SM: H4B

7wii

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The THF-II riboswitch bound to NPR

SM: NPR

7yc8

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Cryo-EM structure of Tetrahymena ribozyme conformation 1 undergoing the first-step self-splicing

SM: GTP

7ycg

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Cryo-EM structure of Tetrahymena ribozyme conformation 2 undergoing the first-step self-splicing

SM: GTP

7ych

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Cryo-EM structure of Tetrahymena ribozyme conformation 3 undergoing the first-step self-splicing

SM: GTP

7yci

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Cryo-EM structure of Tetrahymena ribozyme conformation 4 undergoing the first-step self-splicing

SM: GTP

7zj4

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Ligand bound state of a brocolli-pepper aptamer FRET tile

SM: 1TU J93

8a3d

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Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound

SM: EPE HMT SPM

8a5i

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Cryo-EM structure of Lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.

SM: 3QB

8akn

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Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome

SM: SPM

8am9

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Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome

SM: SPM

8ana

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Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit

SM: SPM

8any

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Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA

SM: NAD SPM

8auv

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Cryo-EM structure of the plant 40S subunit

SM: SPM SPM SPM