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Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

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2077 RNA-SM complexes found
Structure of complex 8cgr

8cgr

Apramycin bound to the 30S body

SM: AM2 AM2 AM2

Structure of complex 8cgu

8cgu

Gentamicin bound to the 30S body

SM: LLL LLL LLL LLL

Structure of complex 8cgv

8cgv

Tiamulin bound to the 50S subunit

SM: MUL P8F P8F

Structure of complex 8cku

8cku

Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin

SM: GTP

Structure of complex 8cq7

8cq7

Crystal structure of phyllanthoside bound to the Candida albicans 80S ribosome

SM: 3K5 3K5

Structure of complex 8cqw

8cqw

Crystal structure of the Candida albicans 80S ribosome in complex with Hygromycin B

SM: 3K5 3K5 HYG HYG

Structure of complex 8cre

8cre

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

SM: 3K5 3K5 GET GET

Structure of complex 8crx

8crx

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

SM: V7A V7A

Structure of complex 8csr

8csr

Human mitochondrial small subunit assembly intermediate (State C)

SM: NAD

Structure of complex 8css

8css

Human mitochondrial small subunit assembly intermediate (State D)

SM: NAD

Structure of complex 8cst

8cst

Human mitochondrial small subunit assembly intermediate (State E)

SM: NAD

Structure of complex 8csu

8csu

Human mitochondrial small subunit assembly intermediate (State C*)

SM: NAD

Structure of complex 8cvm

8cvm

Cutibacterium acnes 50S ribosomal subunit with P-site tRNA and Sarecycline bound in the local refined map

SM: V7A

Structure of complex 8cvo

8cvo

Cutibacterium acnes 30S ribosomal subunit with Sarecycline bound, head domain only in the local refined map

SM: V7A

Structure of complex 8d28

8d28

Crystal structure of theophylline aptamer in complex with theophylline

SM: TEP TEP

Structure of complex 8d2a

8d2a

Crystal structure of theophylline aptamer in complex with TAL3

SM: QB3 QB3

Structure of complex 8d2b

8d2b

Crystal structure of theophylline aptamer in complex with TAL2

SM: QAX QAX

Structure of complex 8d5l

8d5l

Crystal structure of theophylline aptamer in complex with TAL1

SM: QIJ QIJ QIJ QIJ

Structure of complex 8d5o

8d5o

Crystal structure of theophylline aptamer in complex with TAL4

SM: QEU QEU

Structure of complex 8dh1

8dh1

T7 RNA polymerase elongation complex with unnatural base dDs-PaTP pair

SM: S8L

Structure of complex 8dh4

8dh4

T7 RNA polymerase elongation complex with unnatural base dPa-DsTP pair

SM: S96 S96

Structure of complex 8dh5

8dh5

T7 RNA polymerase elongation complex with unnatural base dPa-ATP mismatch

SM: ATP ATP ATP ATP

Structure of complex 8e30

8e30

E. coli 50S ribosome bound to compound streptogramin A analog 3142

SM: UE6

Structure of complex 8e32

8e32

E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1

SM: UCX UDF

Structure of complex 8e36

8e36

E. coli 50S ribosome bound to compound streptogramin A analog 3146

SM: UEC

Structure of complex 8e3o

8e3o

E. coli 50S ribosome bound to solithromycin and VM1

SM: EM1 VIR

Structure of complex 8e41

8e41

E. coli 50S ribosome bound to tiamulin and VS1

SM: MUL

Structure of complex 8e42

8e42

E. coli 50S ribosome bound to tiamulin and azithromycin

SM: MUL ZIT

Structure of complex 8e43

8e43

E. coli 50S ribosome bound to compound streptogramin A analog 3336

SM: UI0

Structure of complex 8e44

8e44

E. coli 50S ribosome bound to antibiotic analog SLC09

SM: UI9

Structure of complex 8e48

8e48

E. coli 50S ribosome bound to antibiotic analog SLC30

SM: UIF

Structure of complex 8e49

8e49

E. coli 50S ribosome bound to antibiotic analog SLC31

SM: UH0

Structure of complex 8e85

8e85

Human DNA polymerase eta-DNA-rG-ended primer-dGMPNPP ternary mismatch complex with Mn2+

SM: XG4

Structure of complex 8e86

8e86

Human DNA polymerase eta-DNA-rC-ended primer-dGMPNPP ternary mismatch complex with Mn2+

SM: XG4

Structure of complex 8e87

8e87

Human DNA polymerase eta-DNA-rA-ended primer-dGMPNPP ternary mismatch complex with Mg2+

SM: XG4

Structure of complex 8e88

8e88

Human DNA polymerase eta-DNA-rU-ended primer-dGMPNPP ternary mismatch complex with Mg2+

SM: XG4

Structure of complex 8e8b

8e8b

Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:ground state at pH7.0 (K+ MES) with 1 Ca2+ ion

SM: DGT

Structure of complex 8e8c

8e8c

Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 30s

SM: DGT

Structure of complex 8e8d

8e8d

Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 60s

SM: DGT

Structure of complex 8e8e

8e8e

Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 90s

SM: DGT

Structure of complex 8e8f

8e8f

Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 120s

SM: DGT

Structure of complex 8e8g

8e8g

Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 180s

SM: DGT

Structure of complex 8e8h

8e8h

Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 300s

SM: DGT

Structure of complex 8e8j

8e8j

Human DNA polymerase eta-DNA-rG-ended primer-dGMPNPP ternary mismatch complex with Mg2+

SM: XG4

Structure of complex 8e8k

8e8k

Human DNA polymerase eta-DNA-rC-ended primer-dGMPNPP ternary mismatch complex with Mg2+

SM: XG4

Structure of complex 8eiu

8eiu

E. coli 70S ribosome with A-loop mutations U2554C and U2555C

SM: PAR SPM

Structure of complex 8ej3

8ej3

M. tuberculosis RNAP pause escaped complex with Bacillus subtilis NusG and GMPCPP

SM: G2P

Structure of complex 8ekc

8ekc

Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA

SM: T8B

Structure of complex 8emm

8emm

Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates

SM: PAR SPM

Structure of complex 8eos

8eos

M. tuberculosis RNAP elongation complex with NusG and CMPCPP

SM: 2TM

Structure of complex 8ev6

8ev6

Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs

SM: AKN AKN AKN AKN AKN AKN AKN AKN

Structure of complex 8ev7

8ev7

Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAs

SM: KAN KAN KAN KAN KAN KAN KAN

Structure of complex 8evr

8evr

Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II

SM: GDP

Structure of complex 8exy

8exy

M. tuberculosis RNAP paused complex with B. subtilis NusG and GMPCPP

SM: G2P

Structure of complex 8eyu

8eyu

Structure of Beetroot dimer bound to DFAME

SM: X5R X5R

Structure of complex 8eyv

8eyv

Structure of Beetroot dimer bound to DFHO

SM: 747 747

Structure of complex 8eyw

8eyw

Beetroot dimer bound to ThT

SM: TFX TFX

Structure of complex 8f0n

8f0n

Wobble Beetroot (A16U-U38G) dimer bound to DFHO

SM: 747 747

Structure of complex 8f4o

8f4o

Apo structure of the TPP riboswitch aptamer domain

SM: PG4

Structure of complex 8fb3

8fb3

PreQ1-1 (type-1) riboswitch with stacked metabolites and a C10-G34 base pair in the expression platform

SM: PRF PRF PRF PRF PRF PRF