Harnessing RIBOnucleic acid - Small molecules Structures
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Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain
SM: B3P B3P B3P GDP
A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA
SM: OI9 OI9
A. baumannii 70S ribosome-Streptothricin-F complex
SM: OI9
A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA
SM: OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY
A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA
SM: OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY OIY
A. baumannii 70S ribosome-Streptothricin-D complex
Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain
Structure of the pre state human RNA Polymerase I Elongation Complex
SM: 2TM
Crystal structure of the enterovirus 71 polymerase elongation complex (C1S3 form)
SM: CTP
The THF-II riboswitch bound to THF and soaking with SeUrea
SM: THG
The THF-II riboswitch bound to THF
The THF-II riboswitch bound to H4B
SM: H4B
The THF-II riboswitch bound to NPR
SM: NPR
Crystal Structure of Dengue Virus serotype 2 (DENV2) Polymerase Elongation Complex (CTP Form)
SM: CTP CTP CTP CTP CTP CTP
Crystal structure of a C/D-free RNA-guided RNA 2'-O-methyltransferase
SM: SAH SAH
QDE-1 in complex with RNA template, RNA primer and AMPNPP
SM: ZAN ZAN
QDE-1 in complex with RNA template, RNA primer and 3'-dGTP
SM: GTP GTP GTP
QDE-1 in complex with DNA template, RNA primer and 3'-dGTP
SM: GTP GTP
QDE-1 in complex with DNA template, RNA primer and AMPNPP
QDE-1 in complex with 12nt DNA template, ATP and 3'-dGTP
SM: GTP
Cryo-EM structure of Tetrahymena ribozyme conformation 1 undergoing the first-step self-splicing
Cryo-EM structure of Tetrahymena ribozyme conformation 2 undergoing the first-step self-splicing
Cryo-EM structure of Tetrahymena ribozyme conformation 3 undergoing the first-step self-splicing
Cryo-EM structure of Tetrahymena ribozyme conformation 4 undergoing the first-step self-splicing
In situ structure of polymerase complex of mammalian reovirus in the elongation state
SM: UTP
Crystal structure of E. coli heterotetrameric GlyRS in complex with tRNA
SM: JPO JPO
Ligand bound state of a brocolli-pepper aptamer FRET tile
SM: 1TU J93
Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide
SM: OCW
Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound
SM: EPE HMT SPM
Cryo-EM structure of Lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.
SM: 3QB
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome
SM: SPM
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosome
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunit
Human mitochondrial ribosome in complex with LRPPRC, SLIRP, A-site, P-site, E-site tRNAs and mRNA
SM: NAD SPM
Structure of the SFTSV L protein stalled at early elongation [EARLY-ELONGATION]
SM: 2KH EPE
Structure of the SFTSV L protein stalled at early elongation with the endonuclease domain in a raised conformation [EARLY-ELONGATION-ENDO]
SM: 2KH
Structure of the SFTSV L protein stalled at late elongation [LATE-ELONGATION]
Cryo-EM structure of the plant 40S subunit
SM: SPM SPM SPM
E. coli 70S ribosome bound to thermorubin and fMet-tRNA
SM: T8B
Cryo-EM structure of the plant 60S subunit
SM: SPM SPM
Cryo-EM structure of the plant 80S ribosome
SM: SPM SPM SPM SPM SPM
Early transcription elongation state of influenza A/H7N9 polymerase stalled with incoming GTP analogue
SM: G2P
Yeast 80S, ES7s delta, eIF5A, Stm1 containing
SM: 3HE
Giardia ribosome chimeric hybrid-like GDP+Pi bound state (B1)
SM: GDP
Structure of the TRAP complex with the Sec translocon and a translating ribosome
Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
SM: 3K5 3K5 TIX TIX
Long Interspersed Nuclear Element 1 (LINE-1) reverse transcriptase ternary complex with hybrid duplex and dTTP
SM: TTP
Omadacycline and spectinomycin bound to the 30S ribosomal subunit head
SM: SCM U3B
Streptomycin and Hygromycin B bound to the 30S body
SM: 5I0 HY0 HY0 HY0 SCM
Structure of human mitochondrial CCA-adding enzyme in complex with mitochondrial pre-tRNA-Ile
SM: CDP
Kasugamycin bound to the 30S body
SM: KSG
Retapamulin and Capreomycin bound to the 50S subunit
SM: G34
Tetracycline bound to the 30S head
SM: TAC
Solution structure of the RNA helix formed by the 5'-end of U1 snRNA and an A-1 bulged 5'-splice site in complex with SMN-CY
SM: ULR
Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
Eravacycline bound to the 30S head
SM: YQM
Clindamycin bound to the 50S subunit
SM: AM2 CLY
Pentacycline TP038 bound to the 30S head
SM: P8F
Streptomycin bound to the 30S body
SM: 5I0 TAC
Lincomycin and Avilamycin bound to the 50S subunit
Current selection range: to
Filter entries " Experimental resolution " between the two values. Global DB range: 0.6 – 11.2
Filter entries " Molecular weight (compound) " between the two values. Global DB range: 150 – 1000
Filter entries " Deposition date " between the two values. Global DB range: 1986 – 2027
Filter entries " Molecular weight (complex) " between the two values. Global DB range: 0 – 13090
Filter entries " Number of atoms " between the two values. Global DB range: 5 – 70
Filter entries " Number of interacting chains " between the two values. Global DB range: 1 – 4
Filter entries " Pocket size " between the two values. Global DB range: 15.9 – 394.0
Filter entries " SiteScore " between the two values. Global DB range: 0.3 – 1.3
Filter entries " Dscore " between the two values. Global DB range: -0.1 – 1.4
Filter entries " Exposure " between the two values. Global DB range: 0.1 – 1.0
Filter entries " Enclosure " between the two values. Global DB range: 0.3 – 1.0
Filter entries " Hydrophobicity " between the two values. Global DB range: 0.0 – 3.1
Filter entries " Hydrophilicity " between the two values. Global DB range: 0.2 – 2.8
Filter entries " Donor/Acceptor " between the two values. Global DB range: 0.0 – 5.0
Filter entries " Volume " between the two values. Global DB range: 21.2 – 1528.8