HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8e8j

System information

Experimental technique X-ray
Experimental resolution 2.40
System mass 55.25 kDa
Deposition year 2022
Molecule type RNA/DNA/Protein
# RNA entities 1
Organism N/A
RCSB PDB Entry 8e8j
Reference Chang Caleb, Lee Luo Christie, Eleraky Sarah, Lin Aaron, Zhou Grace, Gao Yang. . Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase η and reduces DNA synthesis fidelity Journal of Biological Chemistry

Compound XG4
Residue . / 503
Chain F / A
Non-redundant True
Interacting RNA chains C/P
RNA environment detailled DNA, protein, ion
RNA environment global RNA/DNA/Protein
RNA family chains C/P: RNA/DNA_hybrid
RNA family global RNA/DNA_hybrid
Volume 311.44 Å3
Hydrophobicity 0.097
Hydrophilicity 1.638
Buriedness 0.714
Don/acc character 0.365
SiteScore 1.010
D Score 0.834
Kd