Complex 8f0n
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.85 |
| System mass | 32.84 kDa |
| Deposition year | 2022 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 8f0n |
| Reference | Passalacqua Luiz F. M., Starich Mary R., Link Katie A., Wu Jiahui, Knutson Jay R., Tjandra Nico, Jaffrey Samie R., Ferré-D’Amaré Adrian R.. . Co-crystal structures of the fluorogenic aptamer Beetroot show that close homology may not predict similar RNA architecture Nature Communications |
| Equivalence Class |
NR_all_98067.3
BGSU version: 4.49 |
| Compound | 747 |
| Residue | . / 103 |
| Chain | E / B |
| Non-redundant | True |
| Interacting RNA chains | A/B |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/B: synthetic construct |
| RNA family global | synthetic construct |
| Volume | 200.66 Å3 |
| Hydrophobicity | 1.180 |
| Hydrophilicity | 0.657 |
| Buriedness | 0.604 |
| Don/acc character | 4.429 |
| SiteScore | 1.161 |
| D Score | 1.088 |
| Kd | — |
| Compound | 747 |
| Residue | . / 104 |
| Chain | I / A |
| Non-redundant | True |
| Interacting RNA chains | B/A |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | B/A: synthetic construct |
| RNA family global | synthetic construct |
| Volume | 426.01 Å3 |
| Hydrophobicity | 0.544 |
| Hydrophilicity | 1.050 |
| Buriedness | 0.689 |
| Don/acc character | 1.324 |
| SiteScore | 1.144 |
| D Score | 1.011 |
| Kd | — |