Harnessing RIBOnucleic acid - Small molecules Structures
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Structure of the Arabidopsis thaliana thiamine pyrophosphate riboswitch with its regulatory ligand
SM: TPP TPP
Crystal structure of thiamine pyrophosphate-specific riboswitch in complex with thiamine pyrophosphate
Structure of the S-adenosylmethionine riboswitch mRNA regulatory element
SM: SAM
Crystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, manganese ions
SM: TPP
Crystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, barium ions
Crystal structure of an E. coli thi-box riboswitch bound to thiamine monophosphate
SM: TPS
Crystal structure of an E. coli thi-box riboswitch bound to benfotiamine
SM: BFT
Crystal structure of an E. coli thi-box riboswitch bound to pyrithiamine
SM: 218
Solution NMR Structure of the 27 nucleotide engineered neomycin sensing riboswitch RNA-ribostmycin complex
SM: RIO
Solution structure of a preQ1 riboswitch (Class I) aptamer bound to preQ1
SM: PRF
Solution NMR structure of a preQ1 Class II riboswitch from Streptococcus pneumoniae
Solution NMR-structure of the neomycin sensing riboswitch RNA bound to paromomycin
SM: PAR
Solution NMR Structure of the 27 nucleotide engineered neomycin sensing riboswitch RNA-ribostamycin complex
SAM-II riboswitch bound to S-adenosylmethionine
SM: SAM SAM SAM
Crystal structure of the SAM-I riboswitch A94G U34 G18U G19U variant in complex with SAM
SAM-I riboswitch with a G2nA mutation in the Kink turn in complex with S-adenosylmethionine
Crystal structure of a F. nucleatum FMN riboswitch bound to FMN
SM: FMN
Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch
Structure of the eukaryotic TPP-specific riboswitch bound to the antibacterial compound pyrithiamine pyrophosphate
SM: PYI PYI
Structure of the thiamine pyrophosphate-specific riboswitch bound to oxythiamine pyrophosphate
SM: D2X D2X
CRYSTAL STRUCTURE OF THE THERMOTOGA MARITIMA LYSINE RIBOSWITCH BOUND TO S-(2-aminoethyl)-L-cysteine
SM: SLZ
Crystal structure of the Thermotoga maritima lysine riboswitch bound to lysine
SM: 1PE 1PE 1PE
Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine, Cs+ Soak
SM: 1PE
Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine, IRIDIUM HEXAMINE SOAK
Crystallization of the Thermotoga maritima lysine riboswitch bound to homoarginine
SM: 1PE HRG
Crystallization of the Thermotoga maritima lysine riboswitch bound to N6-1-iminoethyl-L-Lysine
SM: IEL
Structure of an RNA-2'-deoxyguanosine complex
SM: GNG GNG
Crystal Structure of the SMK box (SAM-III) Riboswitch with SAM
Crystal Structures of the SMK box (SAM-III) Riboswitch with SAH
SM: SAH
Crystal Structures of the SMK box (SAM-III) Riboswitch with Se-SAM
SM: EEM
Crystal structure of an in vitro evolved tetracycline aptamer and artificial riboswitch
SM: CTC
Crystal structure of the FMN riboswitch bound to FMN
Crystal structure of the FMN riboswitch bound to FMN, iridium hexamine soak.
Crystal structure of the FMn riboswitch bound to FMN, Ba2+ soak.
Crystal structure of the FMN riboswitch bound to FMN, Cs+ soak.
Crystal structure of the FMN riboswitch bound to FMN, Mn2+ soak.
Crystal structure of the FMN riboswitch bound to FMN, cobalt hexammine soak.
Crystal structure of the FMN riboswitch bound to FMN, split RNA.
Crystal structure of the FMN riboswitch bound to riboflavin.
SM: RBF
Crystal structure of the FMN riboswitch bound to roseoflavin
SM: RS3
Crystal structure of guanine riboswitch C74U mutant bound to 6-chloroguanine
SM: 6GU
Crystal structure of guanine riboswitch bound to 6-O-methylguanine
SM: 6GO
Cocrystal structure of a class-I preQ1 riboswitch
SM: PRF PRF PRF
The structural basis for recognition of the preQ0 metabolite by an unusually small riboswitch aptamer domain
SM: PQ0
Guanine riboswitch bound to 6-chloroguanine
Crystal structure of the guanine riboswitch C74U mutant bound to 6-O-methylguanine
Guanine riboswitch A21G,U75C mutant bound to 6-chloroguanine
TteSAM-I riboswitch variant A94GU34C bound to sinefungin
SM: SFG
Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAH
Crystal structure of T. tencongensis SAM-I riboswitch variant A94G/U34 bound with SAM
Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAM in manganese chloride
Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G mutant A6C/U7G/A87C/U88G bound with SAM
Free-state structural transitions of the SAM-I riboswitch
SAM-I riboswitch from T. tencongensis variant A94G bound with SAM
Structure of a c-di-GMP riboswitch from V. cholerae
SM: C2E
Co-crystal structure of a bacterial c-di-GMP riboswitch
SM: C2E C2E
Crystal structure of the E. coli ThiM riboswitch in complex with thiamine pyrophosphate and the U1A crystallization module
Cocrystal structure of a mutant class-I preQ1 riboswitch
Crystal Structure of the G20A mutant c-di-GMP riboswith bound to c-di-GMP
Crystal Structure of the C92U mutant c-di-GMP riboswith bound to c-di-GMP
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Filter entries " Experimental resolution " between the two values. Global DB range: 0.6 – 11.2
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Filter entries " Deposition date " between the two values. Global DB range: 1986 – 2027
Filter entries " Molecular weight (complex) " between the two values. Global DB range: 0 – 13090
Filter entries " Number of atoms " between the two values. Global DB range: 5 – 70
Filter entries " Number of interacting chains " between the two values. Global DB range: 1 – 4
Filter entries " Pocket size " between the two values. Global DB range: 15.9 – 394.0
Filter entries " SiteScore " between the two values. Global DB range: 0.3 – 1.3
Filter entries " Dscore " between the two values. Global DB range: -0.1 – 1.4
Filter entries " Exposure " between the two values. Global DB range: 0.1 – 1.0
Filter entries " Enclosure " between the two values. Global DB range: 0.3 – 1.0
Filter entries " Hydrophobicity " between the two values. Global DB range: 0.0 – 3.1
Filter entries " Hydrophilicity " between the two values. Global DB range: 0.2 – 2.8
Filter entries " Donor/Acceptor " between the two values. Global DB range: 0.0 – 5.0
Filter entries " Volume " between the two values. Global DB range: 21.2 – 1528.8
