HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3e5f

System information

Experimental technique X-ray
Experimental resolution 2.70
System mass 19.16 kDa
Deposition year 2008
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 3e5f
Reference Lu Changrui, Smith Angela M, Fuchs Ryan T, Ding Fang, Rajashankar Kanagalaghatta, Henkin Tina M, Ke Ailong. . Crystal structures of the SAM-III/SMK riboswitch reveal the SAM-dependent translation inhibition mechanism Nature Structural & Molecular Biology
Equivalence Class NR_all_58167.3
BGSU version: 4.48

Compound EEM
Residue . / 216
Chain Q / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled ion
RNA environment global RNA
RNA family chains A/A: riboswitch
RNA family global riboswitch
Volume 294.98 Å3
Hydrophobicity 0.263
Hydrophilicity 0.958
Buriedness 0.642
Don/acc character 2.464
SiteScore 1.128
D Score 1.013
Kd