HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3d2x

System information

Experimental technique X-ray
Experimental resolution 2.50
System mass 51.09 kDa
Deposition year 2008
Molecule type RNA
# RNA entities 1
Organism Arabidopsis
RCSB PDB Entry 3d2x
Reference Thore Stéphane, Frick Christian, Ban Nenad. . Structural Basis of Thiamine Pyrophosphate Analogues Binding to the Eukaryotic Riboswitch Journal of the American Chemical Society

Compound D2X
Residue . / 85
Chain J / A
Non-redundant False
Interacting RNA chains A/A
Volume 866.76 Å3
Hydrophobicity 0.234
Hydrophilicity 1.232
Buriedness 0.745
Don/acc character 1.492
SiteScore 1.032
D Score 0.986

Compound D2X
Residue . / 84
Chain Q / B
Non-redundant True
Interacting RNA chains B/B
Volume 796.79 Å3
Hydrophobicity 0.191
Hydrophilicity 1.200
Buriedness 0.749
Don/acc character 1.298
SiteScore 1.034
D Score 0.998