Complex 3d2x
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.50 |
| System mass | 51.09 kDa |
| Deposition year | 2008 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Arabidopsis |
| RCSB PDB Entry | 3d2x |
| Reference | Thore Stéphane, Frick Christian, Ban Nenad. . Structural Basis of Thiamine Pyrophosphate Analogues Binding to the Eukaryotic Riboswitch Journal of the American Chemical Society |
| Equivalence Class |
NR_all_27756.3
BGSU version: 4.48 |
| Compound | D2X |
| Residue | . / 85 |
| Chain | J / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/A: riboswitch |
| RNA family global | riboswitch |
| Volume | 292.92 Å3 |
| Hydrophobicity | 0.590 |
| Hydrophilicity | 0.941 |
| Buriedness | 0.787 |
| Don/acc character | 2.766 |
| SiteScore | 0.946 |
| D Score | 0.752 |
| Kd | — |
| Compound | D2X |
| Residue | . / 84 |
| Chain | Q / B |
| Non-redundant | False |
| Interacting RNA chains | B/B |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | B/B: riboswitch |
| RNA family global | riboswitch |
| Volume | 775.87 Å3 |
| Hydrophobicity | 0.232 |
| Hydrophilicity | 1.141 |
| Buriedness | 0.740 |
| Don/acc character | 1.513 |
| SiteScore | 1.178 |
| D Score | 1.012 |
| Kd | — |