Complex 3dil
System information
| Experimental technique | X-ray |
| Experimental resolution | 1.90 |
| System mass | 58.37 kDa |
| Deposition year | 2008 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Thermotoga |
| RCSB PDB Entry | 3dil |
| Reference | Serganov Alexander, Huang Lili, Patel Dinshaw J.. . Structural insights into amino acid binding and gene control by a lysine riboswitch Nature |
| Equivalence Class |
NR_all_29848.3
BGSU version: 4.48 |
| Compound | 1PE |
| Residue | . / 250 |
| Chain | JA / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: riboswitch |
| RNA family global | riboswitch |
| Volume | 248.33 Å3 |
| Hydrophobicity | 0.098 |
| Hydrophilicity | 1.114 |
| Buriedness | 0.728 |
| Don/acc character | 3.178 |
| SiteScore | 0.781 |
| D Score | 0.514 |
| Kd | — |
| Compound | 1PE |
| Residue | . / 251 |
| Chain | KA / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | ion, other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: riboswitch |
| RNA family global | riboswitch |
| Volume | 164.30 Å3 |
| Hydrophobicity | 0.078 |
| Hydrophilicity | 0.963 |
| Buriedness | 0.710 |
| Don/acc character | 3.991 |
| SiteScore | 0.694 |
| D Score | 0.438 |
| Kd | — |
| Compound | 1PE |
| Residue | . / 252 |
| Chain | LA / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/A: riboswitch |
| RNA family global | riboswitch |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |