HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3dio

System information

Experimental technique X-ray
Experimental resolution 2.40
System mass 62.09 kDa
Deposition year 2008
Molecule type RNA
# RNA entities 1
Organism Thermotoga
RCSB PDB Entry 3dio
Reference Serganov Alexander, Huang Lili, Patel Dinshaw J.. . Structural insights into amino acid binding and gene control by a lysine riboswitch Nature
Equivalence Class NR_all_29848.3
BGSU version: 4.48

Compound 1PE
Residue . / 280
Chain HA / X
Non-redundant True
Interacting RNA chains A/X
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/X: riboswitch
RNA family global riboswitch
Volume 23.32 Å3
Hydrophobicity 0.011
Hydrophilicity 0.525
Buriedness 0.321
Don/acc character 4.905
SiteScore 0.716
D Score 0.601
Kd