HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3d2g

System information

Experimental technique X-ray
Experimental resolution 2.25
System mass 51.01 kDa
Deposition year 2008
Molecule type RNA
# RNA entities 1
Organism Arabidopsis
RCSB PDB Entry 3d2g
Reference Thore Stéphane, Frick Christian, Ban Nenad. . Structural Basis of Thiamine Pyrophosphate Analogues Binding to the Eukaryotic Riboswitch Journal of the American Chemical Society

Compound TPP
Residue . / 83
Chain H / A
Non-redundant False
Interacting RNA chains A/A
Volume 818.40 Å3
Hydrophobicity 0.312
Hydrophilicity 1.248
Buriedness 0.741
Don/acc character 0.694
SiteScore 1.029
D Score 0.978

Compound TPP
Residue . / 83
Chain N / B
Non-redundant True
Interacting RNA chains B/B
Volume 828.00 Å3
Hydrophobicity 0.312
Hydrophilicity 1.385
Buriedness 0.772
Don/acc character 0.818
SiteScore 1.050
D Score 0.952