HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3d2g

System information

Experimental technique X-ray
Experimental resolution 2.25
System mass 51.01 kDa
Deposition year 2008
Molecule type RNA
# RNA entities 1
Organism Arabidopsis
RCSB PDB Entry 3d2g
Reference Thore Stéphane, Frick Christian, Ban Nenad. . Structural Basis of Thiamine Pyrophosphate Analogues Binding to the Eukaryotic Riboswitch Journal of the American Chemical Society

Compound TPP
Residue . / 83
Chain H / A
Non-redundant True
Interacting RNA chains A/A
Volume 820.46 Å3
Hydrophobicity 0.229
Hydrophilicity 1.165
Buriedness 0.737
Don/acc character 1.238
SiteScore 1.026
D Score 1.003

Compound TPP
Residue . / 83
Chain N / B
Non-redundant False
Interacting RNA chains B/B
Volume 853.73 Å3
Hydrophobicity 0.285
Hydrophilicity 1.273
Buriedness 0.759
Don/acc character 1.410
SiteScore 1.041
D Score 0.981