HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Compound RS3

Identifiers

  • Canonical SMILES:
    CN(C)c1cc2N(C[C@H](O)[C@H](O)[C@H](O)CO)C3=NC(=O)NC(=O)C3=Nc2cc1C
  • IUPAC name:
    1-deoxy-1-[8-(dimethylamino)-7-methyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl]-D-ribitol
  • InChi:
    InChI=1S/C18H23N5O6/c1-8-4-9-11(5-10(8)22(2)3)23(6-12(25)15(27)13(26)7-24)16-14(19-9)17(28)21-18(29)20-16/h4-5,12-13,15,24-27H,6-7H2,1-3H3,(H,21,28,29)/t12-,13+,15-/m0/s1
  • InChiKey:
    IGQLDUYTWDABFK-GUTXKFCHSA-N

Chemistry rules

Lipinski's RO5 Veber Pfizer's 3/75

External links

RNA-SM complexes

PDB code Deposition date Reference publication
3f4h Oct. 31, 2008 Serganov Alexander, Huang Lili, Patel Dinshaw J.. . Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch Nature

Physicochemical filters

Descriptor Lipinski's RO5 Veber Pfizer's 3/75
Compliance
MW 405.17 g/mol
HBA 10
HBD 5
HBA + HBD
AlogP -1.97
TPSA 164.80
RB 6

Radar chart