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Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

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2077 RNA-SM complexes found
Structure of complex 6pc5

6pc5

E. coli 50S ribosome bound to compounds 46 and VS1

SM: O7V

Structure of complex 6pc6

6pc6

E. coli 50S ribosome bound to compound 47

SM: O7S

Structure of complex 6pc7

6pc7

E. coli 50S ribosome bound to compound 46

SM: O7V

Structure of complex 6pc8

6pc8

E. coli 50S ribosome bound to compound 40q

SM: O7Y

Structure of complex 6pch

6pch

E. coli 50S ribosome bound to compound 21

SM: O8D

Structure of complex 6pcq

6pcq

E. coli 50S ribosome bound to VM2

SM: O8J

Structure of complex 6pcr

6pcr

E. coli 50S ribosome bound to compound 40o

SM: O8P

Structure of complex 6pcs

6pcs

E. coli 50S ribosome bound to compound 40e

SM: O8S

Structure of complex 6pct

6pct

E. coli 50S ribosome bound to compound 41q

SM: O8V

Structure of complex 6pq7

6pq7

Structure of the iMango-III fluorescent aptamer at room temperature.

SM: OXV

Structure of complex 6q57

6q57

X-ray crystal structure of the tetrahydrofolate riboswitch aptamer bound to 5-deazatetrahydropterin

SM: T0A T0A

Structure of complex 6qcv

6qcv

Crystal structure of influenza B polymerase initiation state with capped 14-mer RNA primer and CTP

SM: CTP

Structure of complex 6qiq

6qiq

Crystal structure of seleno-derivative CAG repeats with synthetic CMBL3a compound

SM: J48 J48

Structure of complex 6qir

6qir

Crystal structure of CAG repeats with synthetic CMBL3a compound (model I)

SM: J48 J48 J48 J48

Structure of complex 6qit

6qit

Crystal structure of CAG repeats with synthetic CMBL3b compound

SM: J48 J48 J48 J48

Structure of complex 6qiv

6qiv

Crystal structure of seleno-derivative CAG repeats with synthetic CMBL4 compound

SM: J4H

Structure of complex 6qul

6qul

Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid

SM: AMP JJH

Structure of complex 6qzp

6qzp

High-resolution cryo-EM structure of the human 80S ribosome

SM: HMT HYG

Structure of complex 6rh3

6rh3

Cryo-EM structure of E. coli RNA polymerase elongation complex bound to CTP substrate

SM: CTP

Structure of complex 6rw4

6rw4

Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF3

SM: NAD SPM SRY

Structure of complex 6rw5

6rw5

Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3

SM: NAD SPM SRY

Structure of complex 6s0x

6s0x

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.

SM: ERY

Structure of complex 6s0z

6s0z

Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22) in complex with erythromycin.

SM: ERY

Structure of complex 6szv

6szv

Bat Influenza A polymerase elongation complex with incoming UTP analogue (core + endonuclease only)

SM: 2KH

Structure of complex 6t0v

6t0v

Bat Influenza A polymerase elongation complex with incoming UTP analogue (complete polymerase)

SM: 2KH

Structure of complex 6t3k

6t3k

Structure of Oceanobacillus iheyensis group II intron G-mutant (C289G/C358G/G385C) in the presence of K+, Mg2+ and 5'-exon

SM: EPE EPE EPE SPM SPM

Structure of complex 6t3n

6t3n

Structure of Oceanobacillus iheyensis group II intron G-mutant (C289G/C358G/G385C) in the presence of Na+, Mg2+ and 5'-exon

SM: EPE EPE EPE

Structure of complex 6t3r

6t3r

Structure of Oceanobacillus iheyensis group II intron U-mutant (C289U/C358U/G385A) in the presence of K+, Mg2+ and 5'-exon

SM: EPE EPE SPM SPM

Structure of complex 6t3s

6t3s

Structure of Oceanobacillus iheyensis group II intron U-mutant (C289U/C358U/G385A) in the presence of Na+, Mg2+ and 5'-exon

SM: EPE EPE EPE

Structure of complex 6tb7

6tb7

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine monophosphate (AMP)

SM: AMP

Structure of complex 6tf0

6tf0

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide, reduced (NADH)

SM: NAI

Structure of complex 6tf1

6tf1

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine diphosphate (ADP)

SM: ADP

Structure of complex 6tf2

6tf2

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine 5-triphosphate (ATP)

SM: ATP

Structure of complex 6tf3

6tf3

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Cordycepin 5-triphosphate (3-dATP)

SM: 3AT

Structure of complex 6tfe

6tfe

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with N6-Methyl-adenosine-5'-triphosphate (m6ATP)

SM: N6E

Structure of complex 6tff

6tff

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide (NAD+)

SM: NAD

Structure of complex 6tfg

6tfg

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine 3-phosphate 5-phosphosulfate (APPS)

SM: PPS

Structure of complex 6tfh

6tfh

Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide, reduced (NADH); soaking with Manganese(II) (Mn2+)

SM: NAD

Structure of complex 6tnu

6tnu

Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.

SM: 3HE

Structure of complex 6tz2

6tz2

In situ structure of BmCPV RNA-dependent RNA polymerase at elongation state

SM: ATP UTP

Structure of complex 6u6j

6u6j

RNA-monomer complex containing pyrophosphate linkage

SM: EQ4 EQ4

Structure of complex 6u7y

6u7y

RNA hairpin structure containing one TNA nucleotide as template

SM: C5P

Structure of complex 6u7z

6u7z

RNA hairpin structure containing one TNA nucleotide as primer

SM: C5P

Structure of complex 6u89

6u89

RNA duplex, bound with TNA monomer

SM: TG TG

Structure of complex 6u8f

6u8f

RNA hairpin, bound with TNA monomer

SM: TG

Structure of complex 6u8u

6u8u

RNA duplex bound with TNA 3'-3' imidazolium dimer

SM: Q1V Q1V

Structure of complex 6uc7

6uc7

Structure of guanine riboswitch bound to N2-acetyl guanine

SM: Q44

Structure of complex 6uc8

6uc8

Guanine riboswitch bound to 8-aminoguanine

SM: ANG

Structure of complex 6uc9

6uc9

Guanine riboswitch bound to O6-cyclohexylmethyl guanine

SM: CMG

Structure of complex 6uej

6uej

Crystal structure of human zinc finger antiviral protein bound to RNA

SM: SPM

Structure of complex 6uet

6uet

SAM-bound SAM-IV riboswitch

SM: SAM

Structure of complex 6up0

6up0

Structure of the Mango-III fluorescent aptamer bound to YO3-Biotin

SM: YO3 YO3

Structure of complex 6upy

6upy

RNA polymerase II elongation complex with 5-guanidinohydantoin lesion in state 2E

SM: APC

Structure of complex 6usr

6usr

Telomerase Reverse Transcriptase ternary complex, TERT:DNA:dGpCpp

SM: G2P

Structure of complex 6uu0

6uu0

E. coli sigma-S transcription initiation complex with a 3-nt RNA and a mismatching GTP ("Fresh" crystal soaked with GTP for 1 hour)

SM: GTP

Structure of complex 6uu1

6uu1

E. coli sigma-S transcription initiation complex with a 4-nt RNA and a CTP ("Fresh" crystal soaked with CTP, GTP, and ddTTP for 30 minutes)

SM: CTP

Structure of complex 6uu2

6uu2

E. coli sigma-S transcription initiation complex with 3-nt RNA ("Old" crystal soaked with GTP and ATP for 30 minutes)

SM: GTP

Structure of complex 6uu3

6uu3

E. coli sigma-S transcription initiation complex with a 4-nt RNA and a CTP ("Old" crystal soaked with GTP, ATP, CTP, and ddTTP for 30 minutes)

SM: D4M

Structure of complex 6uu4

6uu4

E. coli sigma-S transcription initiation complex with a 3-nt RNA ("old" crystal soaked with GTP and dinucleotide GpA for 30 minutes)

SM: GTP

Structure of complex 6uu6

6uu6

E. coli sigma-S transcription initiation complex with a 4-nt RNA and a UTP ("Old" crystal soaked with UTP, ddCTP, and dinucleotide ApG for 30 minutes)

SM: UTP