Complex 9fs6
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 2.90 |
| System mass | 1012.79 kDa |
| Deposition year | 2024 |
| Molecule type | RNA/Protein |
| # RNA entities | 3 |
| Organism | Saccharolobus |
| RCSB PDB Entry | 9fs6 |
| Reference | Bourgeois Gabrielle, Coureux Pierre-Damien, Lazennec-Schurdevin Christine, Madru Clément, Gaillard Thomas, Duchateau Magalie, Chamot-Rooke Julia, Bourcier Sophie, Mechulam Yves, Schmitt Emmanuelle. . Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity Nature Communications |
| Compound | SPM |
| Residue | . / 1503 |
| Chain | LA / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 670.91 Å3 |
| Hydrophobicity | 0.095 |
| Hydrophilicity | 1.328 |
| Buriedness | 0.731 |
| Don/acc character | 1.813 |
| SiteScore | 1.022 |
| D Score | 0.946 |
| Compound | SPM |
| Residue | . / 1508 |
| Chain | QA / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 1269.79 Å3 |
| Hydrophobicity | 0.111 |
| Hydrophilicity | 1.284 |
| Buriedness | 0.791 |
| Don/acc character | 1.525 |
| SiteScore | 1.062 |
| D Score | 0.996 |
| Compound | SPM |
| Residue | . / 1517 |
| Chain | ZA / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 439.73 Å3 |
| Hydrophobicity | 0.107 |
| Hydrophilicity | 1.567 |
| Buriedness | 0.807 |
| Don/acc character | 1.568 |
| SiteScore | 1.073 |
| D Score | 0.914 |
| Compound | SPM |
| Residue | . / 1518 |
| Chain | AB / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 869.16 Å3 |
| Hydrophobicity | 0.049 |
| Hydrophilicity | 1.464 |
| Buriedness | 0.769 |
| Don/acc character | 1.339 |
| SiteScore | 1.048 |
| D Score | 0.924 |
| Compound | SPM |
| Residue | . / 1521 |
| Chain | DB / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 300.12 Å3 |
| Hydrophobicity | 0.025 |
| Hydrophilicity | 1.234 |
| Buriedness | 0.739 |
| Don/acc character | 1.830 |
| SiteScore | 1.027 |
| D Score | 0.981 |
| Compound | SPM |
| Residue | . / 1531 |
| Chain | NB / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 147.15 Å3 |
| Hydrophobicity | 1.047 |
| Hydrophilicity | 1.004 |
| Buriedness | 0.744 |
| Don/acc character | 0.850 |
| SiteScore | 0.818 |
| D Score | 0.777 |
| Compound | SPM |
| Residue | . / 1532 |
| Chain | OB / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 205.11 Å3 |
| Hydrophobicity | 0.007 |
| Hydrophilicity | 1.312 |
| Buriedness | 0.671 |
| Don/acc character | 1.340 |
| SiteScore | 0.858 |
| D Score | 0.756 |
| Compound | SPM |
| Residue | . / 1533 |
| Chain | PB / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 1127.78 Å3 |
| Hydrophobicity | 0.062 |
| Hydrophilicity | 1.350 |
| Buriedness | 0.741 |
| Don/acc character | 1.453 |
| SiteScore | 1.029 |
| D Score | 0.945 |
| Compound | SPM |
| Residue | . / 1536 |
| Chain | SB / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 355.69 Å3 |
| Hydrophobicity | 0.039 |
| Hydrophilicity | 1.244 |
| Buriedness | 0.646 |
| Don/acc character | 3.785 |
| SiteScore | 0.965 |
| D Score | 0.922 |
| Compound | SPM |
| Residue | . / 1537 |
| Chain | TB / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 1266.36 Å3 |
| Hydrophobicity | 0.135 |
| Hydrophilicity | 1.249 |
| Buriedness | 0.773 |
| Don/acc character | 2.109 |
| SiteScore | 1.050 |
| D Score | 0.997 |
| Compound | SPM |
| Residue | . / 1538 |
| Chain | UB / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 125.19 Å3 |
| Hydrophobicity | 0.921 |
| Hydrophilicity | 1.068 |
| Buriedness | 0.810 |
| Don/acc character | 3.315 |
| SiteScore | 0.811 |
| D Score | 0.739 |
| Compound | SPM |
| Residue | . / 1539 |
| Chain | VB / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 244.22 Å3 |
| Hydrophobicity | 0.074 |
| Hydrophilicity | 1.076 |
| Buriedness | 0.645 |
| Don/acc character | 3.461 |
| SiteScore | 0.875 |
| D Score | 0.862 |