Complex 9g1z
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 3.10 |
| System mass | 3115.60 kDa |
| Deposition year | 2024 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Candida |
| RCSB PDB Entry | 9g1z |
| Reference | Kolosova Olga, Zgadzay Yury, Stetsenko Artem, Sukhinina Anastasia P., Atamas Anastasia, Validov Shamil, Rogachev Andrey, Usachev Konstantin, Jenner Lasse, Dmitriev Sergey E., Yusupova Gulnara, Guskov Albert, Yusupov Marat. . Mechanism of read-through enhancement by aminoglycosides and mefloquine Proceedings of the National Academy of Sciences |
| Equivalence Class |
NR_all_22526.9,
NR_all_58155.3
BGSU version: 4.49 |
| Compound | SPK |
| Residue | . / 3402 |
| Chain | FC / 1 |
| Non-redundant | True |
| Interacting RNA chains | EB/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | EB/1: rRNA |
| RNA family global | rRNA |
| Volume | 595.79 Å3 |
| Hydrophobicity | 0.225 |
| Hydrophilicity | 1.365 |
| Buriedness | 0.885 |
| Don/acc character | 1.498 |
| SiteScore | 1.125 |
| D Score | 1.026 |
| Kd | — |
| Compound | YMZ |
| Residue | . / 301 |
| Chain | DC / j |
| Non-redundant | True |
| Interacting RNA chains | J/A |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | J/A: rRNA |
| RNA family global | rRNA |
| Volume | 85.41 Å3 |
| Hydrophobicity | 0.608 |
| Hydrophilicity | 0.704 |
| Buriedness | 0.643 |
| Don/acc character | 1.398 |
| SiteScore | 0.787 |
| D Score | 0.787 |
| Kd | — |
| Compound | YMZ |
| Residue | . / 3401 |
| Chain | EC / 1 |
| Non-redundant | True |
| Interacting RNA chains | EB/1 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | EB/1: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |