Complex 9frk
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 3.00 |
| System mass | 1005.46 kDa |
| Deposition year | 2024 |
| Molecule type | RNA/Protein |
| # RNA entities | 3 |
| Organism | Saccharolobus |
| RCSB PDB Entry | 9frk |
| Reference | Bourgeois Gabrielle, Coureux Pierre-Damien, Lazennec-Schurdevin Christine, Madru Clément, Gaillard Thomas, Duchateau Magalie, Chamot-Rooke Julia, Bourcier Sophie, Mechulam Yves, Schmitt Emmanuelle. . Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity Nature Communications |
| Compound | SPM |
| Residue | . / 1559 |
| Chain | OC / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 544.34 Å3 |
| Hydrophobicity | 0.091 |
| Hydrophilicity | 1.348 |
| Buriedness | 0.741 |
| Don/acc character | 1.973 |
| SiteScore | 1.029 |
| D Score | 0.945 |
| Compound | SPM |
| Residue | . / 1564 |
| Chain | TC / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 1231.03 Å3 |
| Hydrophobicity | 0.079 |
| Hydrophilicity | 1.189 |
| Buriedness | 0.767 |
| Don/acc character | 1.800 |
| SiteScore | 1.046 |
| D Score | 1.013 |
| Compound | SPM |
| Residue | . / 1570 |
| Chain | ZC / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 890.08 Å3 |
| Hydrophobicity | 0.021 |
| Hydrophilicity | 1.770 |
| Buriedness | 0.820 |
| Don/acc character | 1.208 |
| SiteScore | 1.082 |
| D Score | 0.855 |
| Compound | SPM |
| Residue | . / 1573 |
| Chain | CD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 510.73 Å3 |
| Hydrophobicity | 0.058 |
| Hydrophilicity | 1.633 |
| Buriedness | 0.774 |
| Don/acc character | 1.162 |
| SiteScore | 1.051 |
| D Score | 0.872 |
| Compound | SPM |
| Residue | . / 1574 |
| Chain | DD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 846.87 Å3 |
| Hydrophobicity | 0.053 |
| Hydrophilicity | 1.450 |
| Buriedness | 0.794 |
| Don/acc character | 1.616 |
| SiteScore | 1.064 |
| D Score | 0.944 |
| Compound | SPM |
| Residue | . / 1577 |
| Chain | GD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 277.14 Å3 |
| Hydrophobicity | 0.052 |
| Hydrophilicity | 1.294 |
| Buriedness | 0.730 |
| Don/acc character | 1.533 |
| SiteScore | 1.021 |
| D Score | 0.956 |
| Compound | SPM |
| Residue | . / 1584 |
| Chain | ND / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 241.81 Å3 |
| Hydrophobicity | 0.181 |
| Hydrophilicity | 1.074 |
| Buriedness | 0.663 |
| Don/acc character | 1.355 |
| SiteScore | 0.729 |
| D Score | 0.671 |
| Compound | SPM |
| Residue | . / 1586 |
| Chain | PD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 260.34 Å3 |
| Hydrophobicity | 0.194 |
| Hydrophilicity | 0.968 |
| Buriedness | 0.635 |
| Don/acc character | 5.438 |
| SiteScore | 0.882 |
| D Score | 0.890 |
| Compound | SPM |
| Residue | . / 1587 |
| Chain | QD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 61.05 Å3 |
| Hydrophobicity | 0.023 |
| Hydrophilicity | 0.956 |
| Buriedness | 0.616 |
| Don/acc character | 2.525 |
| SiteScore | 0.449 |
| D Score | 0.340 |
| Compound | SPM |
| Residue | . / 1588 |
| Chain | RD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 1078.39 Å3 |
| Hydrophobicity | 0.032 |
| Hydrophilicity | 1.485 |
| Buriedness | 0.757 |
| Don/acc character | 1.312 |
| SiteScore | 1.040 |
| D Score | 0.910 |
| Compound | SPM |
| Residue | . / 1590 |
| Chain | TD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 284.00 Å3 |
| Hydrophobicity | 0.063 |
| Hydrophilicity | 1.203 |
| Buriedness | 0.706 |
| Don/acc character | 5.051 |
| SiteScore | 1.006 |
| D Score | 0.972 |
| Compound | SPM |
| Residue | . / 1591 |
| Chain | UD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 886.31 Å3 |
| Hydrophobicity | 0.121 |
| Hydrophilicity | 1.236 |
| Buriedness | 0.741 |
| Don/acc character | 2.263 |
| SiteScore | 1.029 |
| D Score | 0.982 |