HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9fco

System information

Experimental technique Electron Microscopy
Experimental resolution 2.40
System mass 540.64 kDa
Deposition year 2024
Molecule type RNA/Protein
# RNA entities 1
Organism Escherichia
RCSB PDB Entry 9fco
Reference Safdari Haaris A., Morici Martino, Sanchez-Castro Ana, Dallapè Andrea, Paternoga Helge, Giuliodori Anna Maria, Fabbretti Attilio, Milón Pohl, Wilson Daniel N.. . The translation inhibitors kasugamycin, edeine and GE81112 target distinct steps during 30S initiation complex formation Nature Communications

Compound KSG
Residue . / 1601
Chain Q / B
Non-redundant False
Interacting RNA chains A/B, P/Y
RNA environment detailled ion
RNA environment global RNA
RNA family chains A/B: rRNA, P/Y: mRNA
RNA family global multiple
Volume 887.68 Å3
Hydrophobicity 0.348
Hydrophilicity 1.364
Buriedness 0.796
Don/acc character 1.678
SiteScore 1.216
D Score 0.973
Kd