Complex 9g6j
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 2.15 |
| System mass | 3146.79 kDa |
| Deposition year | 2024 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Candida |
| RCSB PDB Entry | 9g6j |
| Reference | Kolosova Olga, Zgadzay Yury, Stetsenko Artem, Sukhinina Anastasia P., Atamas Anastasia, Validov Shamil, Rogachev Andrey, Usachev Konstantin, Jenner Lasse, Dmitriev Sergey E., Yusupova Gulnara, Guskov Albert, Yusupov Marat. . Mechanism of read-through enhancement by aminoglycosides and mefloquine Proceedings of the National Academy of Sciences |
| Compound | GET |
| Residue | . / 3402 |
| Chain | DC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1, D/3 |
| Volume | 353.98 Å3 |
| Hydrophobicity | 0.055 |
| Hydrophilicity | 0.931 |
| Buriedness | 0.690 |
| Don/acc character | 1.835 |
| SiteScore | 0.633 |
| D Score | 0.674 |
| Compound | GET |
| Residue | . / 3403 |
| Chain | EC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1, E/4 |
| Volume | 722.02 Å3 |
| Hydrophobicity | 0.176 |
| Hydrophilicity | 1.283 |
| Buriedness | 0.776 |
| Don/acc character | 1.591 |
| SiteScore | 1.202 |
| D Score | 0.987 |
| Compound | GET |
| Residue | . / 3404 |
| Chain | FC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| Volume | 789.24 Å3 |
| Hydrophobicity | 0.128 |
| Hydrophilicity | 1.182 |
| Buriedness | 0.732 |
| Don/acc character | 0.969 |
| SiteScore | 1.023 |
| D Score | 0.994 |
| Compound | GET |
| Residue | . / 3405 |
| Chain | GC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| Volume | 763.86 Å3 |
| Hydrophobicity | 0.211 |
| Hydrophilicity | 1.070 |
| Buriedness | 0.752 |
| Don/acc character | 1.605 |
| SiteScore | 1.036 |
| D Score | 1.043 |
| Compound | GET |
| Residue | . / 3406 |
| Chain | HC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| Volume | 108.73 Å3 |
| Hydrophobicity | 0.211 |
| Hydrophilicity | 1.161 |
| Buriedness | 0.759 |
| Don/acc character | 1.082 |
| SiteScore | 0.627 |
| D Score | 0.487 |
| Compound | GET |
| Residue | . / 3407 |
| Chain | IC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| Volume | 267.88 Å3 |
| Hydrophobicity | 0.084 |
| Hydrophilicity | 1.249 |
| Buriedness | 0.800 |
| Don/acc character | 0.858 |
| SiteScore | 0.619 |
| D Score | 0.437 |
| Compound | GET |
| Residue | . / 3408 |
| Chain | JC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| Volume | 225.01 Å3 |
| Hydrophobicity | 0.094 |
| Hydrophilicity | 1.273 |
| Buriedness | 0.808 |
| Don/acc character | 2.633 |
| SiteScore | 0.773 |
| D Score | 0.701 |
| Compound | GET |
| Residue | . / 3409 |
| Chain | KC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1, D/3 |
| Volume | 325.51 Å3 |
| Hydrophobicity | 0.198 |
| Hydrophilicity | 0.933 |
| Buriedness | 0.682 |
| Don/acc character | 1.549 |
| SiteScore | 1.099 |
| D Score | 0.967 |
| Compound | GET |
| Residue | . / 3410 |
| Chain | LC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Compound | GET |
| Residue | . / 3411 |
| Chain | MC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| Volume | 630.09 Å3 |
| Hydrophobicity | 0.233 |
| Hydrophilicity | 1.062 |
| Buriedness | 0.730 |
| Don/acc character | 1.896 |
| SiteScore | 1.021 |
| D Score | 1.031 |
| Compound | GET |
| Residue | . / 3412 |
| Chain | NC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| Volume | 793.36 Å3 |
| Hydrophobicity | 0.217 |
| Hydrophilicity | 1.205 |
| Buriedness | 0.811 |
| Don/acc character | 1.974 |
| SiteScore | 1.225 |
| D Score | 1.034 |
| Compound | GET |
| Residue | . / 3413 |
| Chain | OC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| Volume | 651.01 Å3 |
| Hydrophobicity | 0.203 |
| Hydrophilicity | 1.022 |
| Buriedness | 0.718 |
| Don/acc character | 1.837 |
| SiteScore | 1.017 |
| D Score | 1.037 |
| Compound | GET |
| Residue | . / 1801 |
| Chain | PC / A |
| Non-redundant | True |
| Interacting RNA chains | J/A |
| Volume | 430.47 Å3 |
| Hydrophobicity | 0.055 |
| Hydrophilicity | 1.040 |
| Buriedness | 0.677 |
| Don/acc character | 1.721 |
| SiteScore | 0.929 |
| D Score | 0.934 |
| Compound | GET |
| Residue | . / 1802 |
| Chain | QC / A |
| Non-redundant | True |
| Interacting RNA chains | J/A |
| Volume | 269.94 Å3 |
| Hydrophobicity | 0.279 |
| Hydrophilicity | 1.260 |
| Buriedness | 0.733 |
| Don/acc character | 1.787 |
| SiteScore | 0.730 |
| D Score | 0.593 |
| Compound | GET |
| Residue | . / 1803 |
| Chain | RC / A |
| Non-redundant | True |
| Interacting RNA chains | J/A |
| Volume | 375.24 Å3 |
| Hydrophobicity | 0.168 |
| Hydrophilicity | 1.588 |
| Buriedness | 0.790 |
| Don/acc character | 0.509 |
| SiteScore | 0.852 |
| D Score | 0.436 |
| Compound | GET |
| Residue | . / 101 |
| Chain | AD / AT |
| Non-redundant | True |
| Interacting RNA chains | BC/AT |
| Volume | 327.22 Å3 |
| Hydrophobicity | 0.092 |
| Hydrophilicity | 1.087 |
| Buriedness | 0.654 |
| Don/acc character | 1.248 |
| SiteScore | 1.031 |
| D Score | 0.863 |
| Compound | SPK |
| Residue | . / 3401 |
| Chain | CC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| Volume | 347.46 Å3 |
| Hydrophobicity | 0.020 |
| Hydrophilicity | 1.196 |
| Buriedness | 0.638 |
| Don/acc character | 2.299 |
| SiteScore | 1.110 |
| D Score | 0.933 |
| Compound | YMZ |
| Residue | . / 301 |
| Chain | YC / AQ |
| Non-redundant | True |
| Interacting RNA chains | J/A |
| Volume | 137.89 Å3 |
| Hydrophobicity | 0.453 |
| Hydrophilicity | 0.924 |
| Buriedness | 0.653 |
| Don/acc character | 1.228 |
| SiteScore | 0.877 |
| D Score | 0.883 |