HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9f1c

System information

Experimental technique Electron Microscopy
Experimental resolution 3.78
System mass 4099.96 kDa
Deposition year 2024
Molecule type RNA/Protein
# RNA entities 1
Organism Oryctolagus
RCSB PDB Entry 9f1c
Reference Lentzsch Alfred M., Yudin Denis, Gamerdinger Martin, Chandrasekar Sowmya, Rabl Laurenz, Scaiola Alain, Deuerling Elke, Ban Nenad, Shan Shu-ou. . NAC guides a ribosomal multienzyme complex for nascent protein processing Nature

Compound SPM
Residue . / 4947
Chain ZF / B5
Non-redundant True
Interacting RNA chains T/B5
Volume 242.16 Å3
Hydrophobicity 0.033
Hydrophilicity 1.089
Buriedness 0.614
Don/acc character 1.565
SiteScore 0.820
D Score 0.794

Compound SPM
Residue . / 5203
Chain VP / B5
Non-redundant True
Interacting RNA chains T/B5
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound SPM
Residue . / 1939
Chain IZ / A2
Non-redundant True
Interacting RNA chains LB/A2
Volume 728.53 Å3
Hydrophobicity 0.312
Hydrophilicity 1.028
Buriedness 0.763
Don/acc character 2.292
SiteScore 1.196
D Score 1.062