Complex 9fra
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 2.80 |
| System mass | 1007.13 kDa |
| Deposition year | 2024 |
| Molecule type | RNA/Protein |
| # RNA entities | 3 |
| Organism | Saccharolobus |
| RCSB PDB Entry | 9fra |
| Reference | Bourgeois Gabrielle, Coureux Pierre-Damien, Lazennec-Schurdevin Christine, Madru Clément, Gaillard Thomas, Duchateau Magalie, Chamot-Rooke Julia, Bourcier Sophie, Mechulam Yves, Schmitt Emmanuelle. . Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity Nature Communications |
| Compound | SPM |
| Residue | . / 1556 |
| Chain | MC / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 632.83 Å3 |
| Hydrophobicity | 0.073 |
| Hydrophilicity | 1.310 |
| Buriedness | 0.725 |
| Don/acc character | 1.939 |
| SiteScore | 1.018 |
| D Score | 0.948 |
| Compound | SPM |
| Residue | . / 1561 |
| Chain | RC / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 1348.33 Å3 |
| Hydrophobicity | 0.103 |
| Hydrophilicity | 1.217 |
| Buriedness | 0.785 |
| Don/acc character | 1.829 |
| SiteScore | 1.058 |
| D Score | 1.014 |
| Compound | SPM |
| Residue | . / 1570 |
| Chain | AD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 493.23 Å3 |
| Hydrophobicity | 0.029 |
| Hydrophilicity | 1.643 |
| Buriedness | 0.778 |
| Don/acc character | 1.209 |
| SiteScore | 1.054 |
| D Score | 0.871 |
| Compound | SPM |
| Residue | . / 1571 |
| Chain | BD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 926.44 Å3 |
| Hydrophobicity | 0.082 |
| Hydrophilicity | 1.421 |
| Buriedness | 0.803 |
| Don/acc character | 1.268 |
| SiteScore | 1.070 |
| D Score | 0.958 |
| Compound | SPM |
| Residue | . / 1574 |
| Chain | ED / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 286.06 Å3 |
| Hydrophobicity | 0.028 |
| Hydrophilicity | 1.278 |
| Buriedness | 0.737 |
| Don/acc character | 1.747 |
| SiteScore | 1.026 |
| D Score | 0.965 |
| Compound | SPM |
| Residue | . / 1582 |
| Chain | MD / 2 |
| Non-redundant | True |
| Interacting RNA chains | A/2 |
| Volume | 684.63 Å3 |
| Hydrophobicity | 0.088 |
| Hydrophilicity | 1.076 |
| Buriedness | 0.683 |
| Don/acc character | 1.777 |
| SiteScore | 0.990 |
| D Score | 0.999 |
| Compound | SPM |
| Residue | . / 1585 |
| Chain | PD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 229.12 Å3 |
| Hydrophobicity | 0.144 |
| Hydrophilicity | 0.945 |
| Buriedness | 0.650 |
| Don/acc character | 3.836 |
| SiteScore | 0.835 |
| D Score | 0.828 |
| Compound | SPM |
| Residue | . / 1586 |
| Chain | QD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 100.84 Å3 |
| Hydrophobicity | 0.026 |
| Hydrophilicity | 0.970 |
| Buriedness | 0.630 |
| Don/acc character | 2.350 |
| SiteScore | 0.519 |
| D Score | 0.426 |
| Compound | SPM |
| Residue | . / 1587 |
| Chain | RD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 194.48 Å3 |
| Hydrophobicity | 0.053 |
| Hydrophilicity | 1.398 |
| Buriedness | 0.694 |
| Don/acc character | 1.471 |
| SiteScore | 0.860 |
| D Score | 0.724 |
| Compound | SPM |
| Residue | . / 1588 |
| Chain | SD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 999.16 Å3 |
| Hydrophobicity | 0.028 |
| Hydrophilicity | 1.449 |
| Buriedness | 0.741 |
| Don/acc character | 1.198 |
| SiteScore | 1.029 |
| D Score | 0.912 |
| Compound | SPM |
| Residue | . / 1592 |
| Chain | WD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 281.26 Å3 |
| Hydrophobicity | 0.058 |
| Hydrophilicity | 1.201 |
| Buriedness | 0.695 |
| Don/acc character | 3.544 |
| SiteScore | 0.998 |
| D Score | 0.966 |
| Compound | SPM |
| Residue | . / 1593 |
| Chain | XD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 1168.60 Å3 |
| Hydrophobicity | 0.141 |
| Hydrophilicity | 1.328 |
| Buriedness | 0.799 |
| Don/acc character | 1.622 |
| SiteScore | 1.068 |
| D Score | 0.987 |
| Compound | SPM |
| Residue | . / 1595 |
| Chain | ZD / 2 |
| Non-redundant | False |
| Interacting RNA chains | A/2 |
| Volume | 214.03 Å3 |
| Hydrophobicity | 0.574 |
| Hydrophilicity | 1.083 |
| Buriedness | 0.705 |
| Don/acc character | 2.931 |
| SiteScore | 0.867 |
| D Score | 0.834 |