Complex 9e7f
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 2.53 |
| System mass | 2631.37 kDa |
| Deposition year | 2024 |
| Molecule type | RNA/Protein |
| # RNA entities | 3 |
| Organism | Pyrobaculum |
| RCSB PDB Entry | 9e7f |
| Compound | SPM |
| Residue | . / 3105 |
| Chain | WB / 1 |
| Non-redundant | False |
| Interacting RNA chains | C/1 |
| Volume | 484.32 Å3 |
| Hydrophobicity | 0.022 |
| Hydrophilicity | 1.308 |
| Buriedness | 0.764 |
| Don/acc character | 1.544 |
| SiteScore | 1.044 |
| D Score | 0.972 |
| Compound | SPM |
| Residue | . / 3110 |
| Chain | BC / 1 |
| Non-redundant | False |
| Interacting RNA chains | C/1 |
| Volume | 1066.73 Å3 |
| Hydrophobicity | 0.063 |
| Hydrophilicity | 1.434 |
| Buriedness | 0.817 |
| Don/acc character | 1.941 |
| SiteScore | 1.080 |
| D Score | 0.963 |
| Compound | SPM |
| Residue | . / 3111 |
| Chain | CC / 1 |
| Non-redundant | False |
| Interacting RNA chains | C/1 |
| Volume | 1098.29 Å3 |
| Hydrophobicity | 0.155 |
| Hydrophilicity | 1.438 |
| Buriedness | 0.773 |
| Don/acc character | 1.672 |
| SiteScore | 1.050 |
| D Score | 0.935 |
| Compound | SPM |
| Residue | . / 3117 |
| Chain | IC / 1 |
| Non-redundant | False |
| Interacting RNA chains | C/1 |
| Volume | 305.61 Å3 |
| Hydrophobicity | 0.080 |
| Hydrophilicity | 1.034 |
| Buriedness | 0.660 |
| Don/acc character | 1.799 |
| SiteScore | 0.865 |
| D Score | 0.856 |
| Compound | SPM |
| Residue | . / 3118 |
| Chain | JC / 1 |
| Non-redundant | False |
| Interacting RNA chains | C/1 |
| Volume | 849.27 Å3 |
| Hydrophobicity | 0.032 |
| Hydrophilicity | 1.256 |
| Buriedness | 0.752 |
| Don/acc character | 3.261 |
| SiteScore | 1.036 |
| D Score | 0.982 |
| Compound | SPM |
| Residue | . / 3119 |
| Chain | KC / 1 |
| Non-redundant | False |
| Interacting RNA chains | C/1 |
| Volume | 302.87 Å3 |
| Hydrophobicity | 0.000 |
| Hydrophilicity | 1.536 |
| Buriedness | 0.694 |
| Don/acc character | 1.285 |
| SiteScore | 0.928 |
| D Score | 0.767 |
| Compound | SPM |
| Residue | . / 3123 |
| Chain | OC / 1 |
| Non-redundant | False |
| Interacting RNA chains | C/1 |
| Volume | 1004.99 Å3 |
| Hydrophobicity | 0.038 |
| Hydrophilicity | 1.409 |
| Buriedness | 0.739 |
| Don/acc character | 1.269 |
| SiteScore | 1.027 |
| D Score | 0.924 |
| Compound | SPM |
| Residue | . / 3124 |
| Chain | PC / 1 |
| Non-redundant | False |
| Interacting RNA chains | C/1 |
| Volume | 355.69 Å3 |
| Hydrophobicity | 0.058 |
| Hydrophilicity | 1.211 |
| Buriedness | 0.678 |
| Don/acc character | 1.349 |
| SiteScore | 0.945 |
| D Score | 0.899 |
| Compound | SPM |
| Residue | . / 3125 |
| Chain | QC / 1 |
| Non-redundant | False |
| Interacting RNA chains | C/1 |
| Volume | 588.59 Å3 |
| Hydrophobicity | 0.080 |
| Hydrophilicity | 1.523 |
| Buriedness | 0.757 |
| Don/acc character | 1.760 |
| SiteScore | 1.040 |
| D Score | 0.898 |
| Compound | SPM |
| Residue | . / 3127 |
| Chain | SC / 1 |
| Non-redundant | True |
| Interacting RNA chains | C/1 |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Compound | SPM |
| Residue | . / 3136 |
| Chain | BD / 1 |
| Non-redundant | False |
| Interacting RNA chains | C/1 |
| Volume | 544.34 Å3 |
| Hydrophobicity | 0.028 |
| Hydrophilicity | 1.350 |
| Buriedness | 0.741 |
| Don/acc character | 2.545 |
| SiteScore | 1.029 |
| D Score | 0.944 |
| Compound | SPM |
| Residue | . / 3137 |
| Chain | CD / 1 |
| Non-redundant | False |
| Interacting RNA chains | C/1 |
| Volume | 702.12 Å3 |
| Hydrophobicity | 0.054 |
| Hydrophilicity | 1.290 |
| Buriedness | 0.749 |
| Don/acc character | 2.151 |
| SiteScore | 1.034 |
| D Score | 0.969 |
| Compound | SPM |
| Residue | . / 3138 |
| Chain | DD / 1 |
| Non-redundant | False |
| Interacting RNA chains | C/1 |
| Volume | 556.35 Å3 |
| Hydrophobicity | 0.158 |
| Hydrophilicity | 1.271 |
| Buriedness | 0.798 |
| Don/acc character | 1.685 |
| SiteScore | 1.067 |
| D Score | 1.004 |
| Compound | SPM |
| Residue | . / 3141 |
| Chain | GD / 1 |
| Non-redundant | False |
| Interacting RNA chains | C/1 |
| Volume | 473.00 Å3 |
| Hydrophobicity | 0.057 |
| Hydrophilicity | 1.121 |
| Buriedness | 0.674 |
| Don/acc character | 1.980 |
| SiteScore | 0.984 |
| D Score | 0.979 |
| Compound | SPM |
| Residue | . / 3004 |
| Chain | AK / 4 |
| Non-redundant | False |
| Interacting RNA chains | D/4 |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Compound | SPM |
| Residue | . / 3006 |
| Chain | CK / 4 |
| Non-redundant | False |
| Interacting RNA chains | D/4 |
| Volume | 288.46 Å3 |
| Hydrophobicity | 0.067 |
| Hydrophilicity | 1.328 |
| Buriedness | 0.742 |
| Don/acc character | 1.443 |
| SiteScore | 0.972 |
| D Score | 0.879 |
| Compound | SPM |
| Residue | . / 3011 |
| Chain | HK / 4 |
| Non-redundant | False |
| Interacting RNA chains | D/4 |
| Volume | 213.35 Å3 |
| Hydrophobicity | 0.000 |
| Hydrophilicity | 1.014 |
| Buriedness | 0.695 |
| Don/acc character | 2.225 |
| SiteScore | 0.614 |
| D Score | 0.528 |
| Compound | SPM |
| Residue | . / 3015 |
| Chain | LK / 4 |
| Non-redundant | False |
| Interacting RNA chains | D/4 |
| Volume | 540.22 Å3 |
| Hydrophobicity | 0.220 |
| Hydrophilicity | 1.209 |
| Buriedness | 0.768 |
| Don/acc character | 1.615 |
| SiteScore | 1.047 |
| D Score | 1.007 |