Complex 9e71
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 2.36 |
| System mass | 2559.27 kDa |
| Deposition year | 2024 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Pyrobaculum |
| RCSB PDB Entry | 9e71 |
| Reference | Nissley Amos J., Shulgina Yekaterina, Kivimae Roan W., Downing Blake E., Penev Petar I., Banfield Jillian F., Nayak Dipti D., Cate Jamie H. D.. . Structure of an archaeal ribosome reveals a divergent active site and hibernation factor Nature Microbiology |
| Equivalence Class |
NR_all_42177.3,
NR_all_26765.3
BGSU version: 4.49 |
| Compound | SPM |
| Residue | . / 3013 |
| Chain | JK / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 417.43 Å3 |
| Hydrophobicity | 0.036 |
| Hydrophilicity | 1.077 |
| Buriedness | 0.713 |
| Don/acc character | 1.846 |
| SiteScore | 0.910 |
| D Score | 0.693 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3101 |
| Chain | RB / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 329.28 Å3 |
| Hydrophobicity | 0.137 |
| Hydrophilicity | 1.487 |
| Buriedness | 0.646 |
| Don/acc character | 1.039 |
| SiteScore | 1.115 |
| D Score | 0.843 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3102 |
| Chain | SB / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 294.98 Å3 |
| Hydrophobicity | 0.228 |
| Hydrophilicity | 1.095 |
| Buriedness | 0.688 |
| Don/acc character | 2.122 |
| SiteScore | 0.993 |
| D Score | 0.996 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3103 |
| Chain | TB / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 1095.54 Å3 |
| Hydrophobicity | 0.080 |
| Hydrophilicity | 2.032 |
| Buriedness | 0.853 |
| Don/acc character | 0.819 |
| SiteScore | 1.103 |
| D Score | 0.789 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3104 |
| Chain | UB / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 710.35 Å3 |
| Hydrophobicity | 0.253 |
| Hydrophilicity | 1.416 |
| Buriedness | 0.880 |
| Don/acc character | 1.128 |
| SiteScore | 1.122 |
| D Score | 1.006 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3105 |
| Chain | VB / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 447.62 Å3 |
| Hydrophobicity | 0.080 |
| Hydrophilicity | 1.180 |
| Buriedness | 0.767 |
| Don/acc character | 1.540 |
| SiteScore | 1.196 |
| D Score | 1.016 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3106 |
| Chain | WB / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 494.61 Å3 |
| Hydrophobicity | 0.296 |
| Hydrophilicity | 1.214 |
| Buriedness | 0.677 |
| Don/acc character | 1.450 |
| SiteScore | 1.136 |
| D Score | 0.951 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3107 |
| Chain | XB / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 495.64 Å3 |
| Hydrophobicity | 0.053 |
| Hydrophilicity | 1.950 |
| Buriedness | 0.815 |
| Don/acc character | 0.808 |
| SiteScore | 1.037 |
| D Score | 0.740 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3108 |
| Chain | YB / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 791.30 Å3 |
| Hydrophobicity | 0.173 |
| Hydrophilicity | 1.361 |
| Buriedness | 0.799 |
| Don/acc character | 1.710 |
| SiteScore | 1.067 |
| D Score | 0.976 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3109 |
| Chain | ZB / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 385.19 Å3 |
| Hydrophobicity | 0.035 |
| Hydrophilicity | 2.275 |
| Buriedness | 0.864 |
| Don/acc character | 0.950 |
| SiteScore | 0.912 |
| D Score | 0.461 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3110 |
| Chain | AC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 939.82 Å3 |
| Hydrophobicity | 0.157 |
| Hydrophilicity | 1.640 |
| Buriedness | 0.850 |
| Don/acc character | 1.029 |
| SiteScore | 1.251 |
| D Score | 0.915 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3111 |
| Chain | BC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 653.42 Å3 |
| Hydrophobicity | 0.102 |
| Hydrophilicity | 1.486 |
| Buriedness | 0.832 |
| Don/acc character | 1.547 |
| SiteScore | 1.240 |
| D Score | 0.955 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3112 |
| Chain | CC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 369.41 Å3 |
| Hydrophobicity | 0.019 |
| Hydrophilicity | 1.386 |
| Buriedness | 0.624 |
| Don/acc character | 2.357 |
| SiteScore | 1.100 |
| D Score | 0.863 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3113 |
| Chain | DC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 456.53 Å3 |
| Hydrophobicity | 0.045 |
| Hydrophilicity | 1.371 |
| Buriedness | 0.811 |
| Don/acc character | 2.071 |
| SiteScore | 0.840 |
| D Score | 0.677 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3114 |
| Chain | EC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 276.12 Å3 |
| Hydrophobicity | 0.257 |
| Hydrophilicity | 0.880 |
| Buriedness | 0.648 |
| Don/acc character | 3.051 |
| SiteScore | 0.994 |
| D Score | 1.037 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3115 |
| Chain | FC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 186.94 Å3 |
| Hydrophobicity | 0.139 |
| Hydrophilicity | 1.604 |
| Buriedness | 0.809 |
| Don/acc character | 0.677 |
| SiteScore | 0.625 |
| D Score | 0.327 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3116 |
| Chain | GC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 788.21 Å3 |
| Hydrophobicity | 0.579 |
| Hydrophilicity | 1.156 |
| Buriedness | 0.857 |
| Don/acc character | 2.169 |
| SiteScore | 1.256 |
| D Score | 1.077 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3117 |
| Chain | HC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 304.58 Å3 |
| Hydrophobicity | 0.157 |
| Hydrophilicity | 0.865 |
| Buriedness | 0.659 |
| Don/acc character | 2.189 |
| SiteScore | 1.051 |
| D Score | 0.916 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3118 |
| Chain | IC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 633.52 Å3 |
| Hydrophobicity | 0.191 |
| Hydrophilicity | 1.088 |
| Buriedness | 0.769 |
| Don/acc character | 4.421 |
| SiteScore | 1.197 |
| D Score | 1.046 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3119 |
| Chain | JC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 178.70 Å3 |
| Hydrophobicity | 0.000 |
| Hydrophilicity | 1.315 |
| Buriedness | 0.662 |
| Don/acc character | 1.984 |
| SiteScore | 0.941 |
| D Score | 0.672 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3120 |
| Chain | KC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 205.80 Å3 |
| Hydrophobicity | 0.088 |
| Hydrophilicity | 0.948 |
| Buriedness | 0.675 |
| Don/acc character | 3.018 |
| SiteScore | 0.727 |
| D Score | 0.683 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3121 |
| Chain | LC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 557.38 Å3 |
| Hydrophobicity | 0.584 |
| Hydrophilicity | 1.152 |
| Buriedness | 0.868 |
| Don/acc character | 1.242 |
| SiteScore | 1.264 |
| D Score | 1.085 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3122 |
| Chain | MC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 663.71 Å3 |
| Hydrophobicity | 0.031 |
| Hydrophilicity | 1.645 |
| Buriedness | 0.788 |
| Don/acc character | 1.258 |
| SiteScore | 1.210 |
| D Score | 0.877 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3123 |
| Chain | NC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 458.25 Å3 |
| Hydrophobicity | 0.085 |
| Hydrophilicity | 1.288 |
| Buriedness | 0.771 |
| Don/acc character | 1.027 |
| SiteScore | 1.109 |
| D Score | 0.867 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3124 |
| Chain | OC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 36.02 Å3 |
| Hydrophobicity | 0.065 |
| Hydrophilicity | 1.022 |
| Buriedness | 0.539 |
| Don/acc character | 4.156 |
| SiteScore | 0.478 |
| D Score | 0.200 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3125 |
| Chain | PC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 513.81 Å3 |
| Hydrophobicity | 0.101 |
| Hydrophilicity | 1.509 |
| Buriedness | 0.806 |
| Don/acc character | 1.255 |
| SiteScore | 1.169 |
| D Score | 0.863 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3126 |
| Chain | QC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein, ion, other |
| RNA environment global | RNA/Other |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 688.74 Å3 |
| Hydrophobicity | 0.087 |
| Hydrophilicity | 1.945 |
| Buriedness | 0.816 |
| Don/acc character | 1.128 |
| SiteScore | 1.229 |
| D Score | 0.796 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3127 |
| Chain | RC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 609.51 Å3 |
| Hydrophobicity | 0.194 |
| Hydrophilicity | 1.266 |
| Buriedness | 0.785 |
| Don/acc character | 1.574 |
| SiteScore | 1.208 |
| D Score | 0.999 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3128 |
| Chain | SC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 743.97 Å3 |
| Hydrophobicity | 0.152 |
| Hydrophilicity | 1.509 |
| Buriedness | 0.857 |
| Don/acc character | 0.989 |
| SiteScore | 1.106 |
| D Score | 0.962 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3129 |
| Chain | TC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 712.41 Å3 |
| Hydrophobicity | 0.199 |
| Hydrophilicity | 1.369 |
| Buriedness | 0.878 |
| Don/acc character | 1.623 |
| SiteScore | 1.270 |
| D Score | 1.020 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3130 |
| Chain | UC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 789.24 Å3 |
| Hydrophobicity | 0.125 |
| Hydrophilicity | 1.316 |
| Buriedness | 0.779 |
| Don/acc character | 1.286 |
| SiteScore | 1.054 |
| D Score | 0.978 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3131 |
| Chain | VC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 217.12 Å3 |
| Hydrophobicity | 0.070 |
| Hydrophilicity | 1.074 |
| Buriedness | 0.546 |
| Don/acc character | 2.500 |
| SiteScore | 0.878 |
| D Score | 0.699 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3132 |
| Chain | WC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 920.96 Å3 |
| Hydrophobicity | 0.361 |
| Hydrophilicity | 1.116 |
| Buriedness | 0.852 |
| Don/acc character | 2.531 |
| SiteScore | 1.253 |
| D Score | 1.088 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3133 |
| Chain | XC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 717.90 Å3 |
| Hydrophobicity | 0.154 |
| Hydrophilicity | 1.083 |
| Buriedness | 0.707 |
| Don/acc character | 1.245 |
| SiteScore | 1.156 |
| D Score | 1.011 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3134 |
| Chain | YC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 721.33 Å3 |
| Hydrophobicity | 0.105 |
| Hydrophilicity | 1.469 |
| Buriedness | 0.848 |
| Don/acc character | 1.996 |
| SiteScore | 1.100 |
| D Score | 0.970 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3135 |
| Chain | ZC / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 890.77 Å3 |
| Hydrophobicity | 0.311 |
| Hydrophilicity | 1.230 |
| Buriedness | 0.847 |
| Don/acc character | 2.180 |
| SiteScore | 1.250 |
| D Score | 1.047 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3136 |
| Chain | AD / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 444.87 Å3 |
| Hydrophobicity | 0.146 |
| Hydrophilicity | 1.411 |
| Buriedness | 0.794 |
| Don/acc character | 1.510 |
| SiteScore | 1.214 |
| D Score | 0.956 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3137 |
| Chain | BD / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 466.14 Å3 |
| Hydrophobicity | 0.035 |
| Hydrophilicity | 1.185 |
| Buriedness | 0.710 |
| Don/acc character | 2.568 |
| SiteScore | 1.113 |
| D Score | 0.921 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3138 |
| Chain | CD / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 585.50 Å3 |
| Hydrophobicity | 0.265 |
| Hydrophilicity | 1.173 |
| Buriedness | 0.803 |
| Don/acc character | 1.258 |
| SiteScore | 1.220 |
| D Score | 1.040 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3139 |
| Chain | DD / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | SPM |
| Residue | . / 3140 |
| Chain | ED / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 219.86 Å3 |
| Hydrophobicity | 0.000 |
| Hydrophilicity | 1.345 |
| Buriedness | 0.696 |
| Don/acc character | 1.297 |
| SiteScore | 0.868 |
| D Score | 0.559 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3141 |
| Chain | FD / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 191.05 Å3 |
| Hydrophobicity | 0.121 |
| Hydrophilicity | 0.965 |
| Buriedness | 0.639 |
| Don/acc character | 4.695 |
| SiteScore | 0.813 |
| D Score | 0.609 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3142 |
| Chain | GD / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 155.38 Å3 |
| Hydrophobicity | 0.136 |
| Hydrophilicity | 0.922 |
| Buriedness | 0.536 |
| Don/acc character | 2.462 |
| SiteScore | 0.820 |
| D Score | 0.840 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3143 |
| Chain | HD / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 335.45 Å3 |
| Hydrophobicity | 1.034 |
| Hydrophilicity | 1.112 |
| Buriedness | 0.863 |
| Don/acc character | 1.400 |
| SiteScore | 0.986 |
| D Score | 0.936 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3144 |
| Chain | ID / 1 |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 340.60 Å3 |
| Hydrophobicity | 0.241 |
| Hydrophilicity | 1.050 |
| Buriedness | 0.718 |
| Don/acc character | 2.654 |
| SiteScore | 1.014 |
| D Score | 1.029 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3001 |
| Chain | XJ / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 396.85 Å3 |
| Hydrophobicity | 0.059 |
| Hydrophilicity | 1.444 |
| Buriedness | 0.881 |
| Don/acc character | 0.778 |
| SiteScore | 1.089 |
| D Score | 0.955 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3002 |
| Chain | YJ / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 741.91 Å3 |
| Hydrophobicity | 0.243 |
| Hydrophilicity | 1.072 |
| Buriedness | 0.795 |
| Don/acc character | 1.803 |
| SiteScore | 1.215 |
| D Score | 1.068 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3003 |
| Chain | ZJ / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | protein, ion, other |
| RNA environment global | RNA/Other |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 781.01 Å3 |
| Hydrophobicity | 0.106 |
| Hydrophilicity | 1.372 |
| Buriedness | 0.807 |
| Don/acc character | 1.963 |
| SiteScore | 1.223 |
| D Score | 0.977 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3004 |
| Chain | AK / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | SPM |
| Residue | . / 3005 |
| Chain | BK / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 355.35 Å3 |
| Hydrophobicity | 0.095 |
| Hydrophilicity | 1.248 |
| Buriedness | 0.776 |
| Don/acc character | 1.764 |
| SiteScore | 0.857 |
| D Score | 0.556 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3006 |
| Chain | CK / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 279.55 Å3 |
| Hydrophobicity | 0.102 |
| Hydrophilicity | 1.285 |
| Buriedness | 0.745 |
| Don/acc character | 1.082 |
| SiteScore | 1.140 |
| D Score | 0.915 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3007 |
| Chain | DK / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 339.57 Å3 |
| Hydrophobicity | 0.137 |
| Hydrophilicity | 0.998 |
| Buriedness | 0.706 |
| Don/acc character | 4.940 |
| SiteScore | 1.090 |
| D Score | 0.944 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3008 |
| Chain | EK / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 713.10 Å3 |
| Hydrophobicity | 0.077 |
| Hydrophilicity | 1.339 |
| Buriedness | 0.730 |
| Don/acc character | 1.328 |
| SiteScore | 1.134 |
| D Score | 0.893 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3009 |
| Chain | FK / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 661.99 Å3 |
| Hydrophobicity | 0.117 |
| Hydrophilicity | 1.350 |
| Buriedness | 0.753 |
| Don/acc character | 1.167 |
| SiteScore | 1.186 |
| D Score | 0.951 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3010 |
| Chain | GK / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 645.18 Å3 |
| Hydrophobicity | 0.094 |
| Hydrophilicity | 1.593 |
| Buriedness | 0.834 |
| Don/acc character | 1.436 |
| SiteScore | 1.091 |
| D Score | 0.921 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3011 |
| Chain | HK / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 157.78 Å3 |
| Hydrophobicity | 0.020 |
| Hydrophilicity | 0.858 |
| Buriedness | 0.690 |
| Don/acc character | 4.228 |
| SiteScore | 0.640 |
| D Score | 0.383 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3012 |
| Chain | IK / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 564.58 Å3 |
| Hydrophobicity | 0.208 |
| Hydrophilicity | 1.111 |
| Buriedness | 0.784 |
| Don/acc character | 2.156 |
| SiteScore | 1.154 |
| D Score | 0.980 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3014 |
| Chain | KK / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 215.75 Å3 |
| Hydrophobicity | 0.000 |
| Hydrophilicity | 1.325 |
| Buriedness | 0.854 |
| Don/acc character | 1.487 |
| SiteScore | 0.709 |
| D Score | 0.501 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3015 |
| Chain | LK / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 349.17 Å3 |
| Hydrophobicity | 0.409 |
| Hydrophilicity | 0.976 |
| Buriedness | 0.786 |
| Don/acc character | 2.504 |
| SiteScore | 1.210 |
| D Score | 1.079 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3016 |
| Chain | MK / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 842.07 Å3 |
| Hydrophobicity | 0.411 |
| Hydrophilicity | 1.306 |
| Buriedness | 0.866 |
| Don/acc character | 1.560 |
| SiteScore | 1.262 |
| D Score | 1.034 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3017 |
| Chain | NK / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 324.14 Å3 |
| Hydrophobicity | 0.059 |
| Hydrophilicity | 1.105 |
| Buriedness | 0.642 |
| Don/acc character | 1.391 |
| SiteScore | 1.105 |
| D Score | 0.956 |
| Kd | — |
| Compound | SPM |
| Residue | . / 3018 |
| Chain | OK / 4 |
| Non-redundant | True |
| Interacting RNA chains | C/4 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | C/4: rRNA |
| RNA family global | rRNA |
| Volume | 655.47 Å3 |
| Hydrophobicity | 0.283 |
| Hydrophilicity | 0.935 |
| Buriedness | 0.724 |
| Don/acc character | 3.187 |
| SiteScore | 1.188 |
| D Score | 1.069 |
| Kd | — |
| Compound | SPM |
| Residue | . / 201 |
| Chain | QN / AL |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Kd | — |
| Compound | SPM |
| Residue | . / 101 |
| Chain | WN / Ah |
| Non-redundant | True |
| Interacting RNA chains | B/1 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | B/1: rRNA |
| RNA family global | rRNA |
| Volume | 268.23 Å3 |
| Hydrophobicity | 0.186 |
| Hydrophilicity | 1.296 |
| Buriedness | 0.816 |
| Don/acc character | 1.814 |
| SiteScore | 0.815 |
| D Score | 0.669 |
| Kd | — |