HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9f1d

System information

Experimental technique Electron Microscopy
Experimental resolution 3.26
System mass 4125.66 kDa
Deposition year 2024
Molecule type RNA/Protein
# RNA entities 1
Organism Oryctolagus
RCSB PDB Entry 9f1d
Reference Lentzsch Alfred M., Yudin Denis, Gamerdinger Martin, Chandrasekar Sowmya, Rabl Laurenz, Scaiola Alain, Deuerling Elke, Ban Nenad, Shan Shu-ou. . NAC guides a ribosomal multienzyme complex for nascent protein processing Nature

Compound SPM
Residue . / 5059
Chain PI / B5
Non-redundant True
Interacting RNA chains A/B5
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound SPM
Residue . / 5194
Chain UN / B5
Non-redundant True
Interacting RNA chains A/B5
Volume 217.46 Å3
Hydrophobicity 0.017
Hydrophilicity 1.173
Buriedness 0.649
Don/acc character 1.407
SiteScore 0.773
D Score 0.698

Compound SPM
Residue . / 1962
Chain WAA / A2
Non-redundant True
Interacting RNA chains PB/A2
Volume 715.84 Å3
Hydrophobicity 0.340
Hydrophilicity 0.985
Buriedness 0.766
Don/acc character 2.803
SiteScore 1.206
D Score 1.079