HARIBOSS - RNA-SM complexes list

8f4o

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Apo structure of the TPP riboswitch aptamer domain

SM: PG4

8fb3

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PreQ1-1 (type-1) riboswitch with stacked metabolites and a C10-G34 base pair in the expression platform

SM: PRF PRF PRF PRF PRF PRF

8fza

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Class I type III preQ1 riboswitch from E. coli

SM: PRF PRF

8hb1

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Crystal structure of NAD-II riboswitch (two strands) with NMN

SM: NMN NMN

8hb3

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Crystal structure of NAD-II riboswitch (two strands) with NR

SM: NNR NNR

8hb8

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Crystal structure of NAD-II riboswitch (single strand) with NMN

SM: NMN NMN

8hba

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Crystal structure of NAD-II riboswitch (single strand) with NAD

SM: NAD NAD NAD NMN

8hzd

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A new fluorescent RNA aptamer bound with N618

SM: O2I O2I

8hze

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A new fluorescent RNA aptamer bound with N

SM: NI4 NI4

8hzf

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A new fluorescent RNA aptamer bound with N565

SM: NJL NJL

8hzj

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A new fluorescent RNA aptamer bound with N571

SM: O00 O00

8hzk

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A new fluorescent RNA aptamer bound with N, iridium hexammine soak

SM: NI4 NI4

8hzl

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A new fluorescent RNA aptamer_III bound with N

SM: NI4 NI4 NI4 NI4 NI4 NI4

8hzm

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A new fluorescent RNA aptamer bound with N, manganese soak

SM: NI4 NI4

8i3z

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Crystal structure of NAD-II riboswitch (two strands) with NMN at 1.67 angstrom

SM: NMN NMN

8i43

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Interaction between a fluoroquinolone derivative KG022 and RNAs: effect of base pairs 3' adjacent to the bulge out residues

SM: 53D

8i44

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Interaction between a fluoroquinolone derivative KG022 and RNAs: effect of base pairs 3' adjacent to the bulge out residues

SM: 53D

8i45

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Interaction between a fluoroquinolone derivative KG022 and RNAs: effect of base pairs 3' adjacent to the bulge out residues

SM: 53D

8i46

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Interaction between a fluoroquinolone derivative KG022 and RNAs: effect of base pairs 3' adjacent to the bulge out residues

SM: 53D

8i7n

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The Tet-S1 state of G264A mutated Tetrahymena group I intron with 6nt 3'/5'-exon and 2-aminopurine nucleoside

SM: OJI

8k7w

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Crystal structure of Broccoli aptamer with DFHBI-1T

SM: 2ZY

8k85

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Crystal structure of Red Broccoli aptamer with OBI

SM: A1EBI A1EBI

8keb

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Crystal structure of 2'-dG-III riboswitch with 2'-dG

SM: GNG

8khh

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Crystal structure of 2'-dG-III riboswitch with guanosine

SM: GMP GMP

8ols

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Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and intronistat B

SM: EPE EPE SPM SPM VTE

8olv

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Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and ARN25850

SM: EPE EPE SPM VTR

8oly

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Structure of Oceanobacillus iheyensis group II intron post first step of splicing in the presence of K+, Mg2+ and intronistat B

SM: EPE EPE EPE SPM SPM

8olz

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Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 2h30 soaking

SM: EPE SPM VTE

8om0

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Structure of Oceanobacillus iheyensis group II intron in the presence of Na+, Mg2+ and intronistat B

SM: GDE

8qmh

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Crystal structure of RNA G2C4 repeats in complex with small synthetic molecule ANP77

SM: W53

8swg

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RNA duplex bound with GpppA dinucleotide ligand

SM: G3A G3A

8swo

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GpppA dinucleotide ligand binding to RNA UC template

SM: G3A G3A

8r62

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Solution structure of Risdiplam bound to the RNA duplex formed upon 5'-splice site recognition

SM: Y59

8r63

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Solution structure of branaplam bound to the RNA duplex formed upon 5'-splice site recognition

SM: Y53

8r8p

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Solution structure of SMN-CX bound to the RNA helix formed upon SMN2 exon7 5'-splice site recognition

SM: YB3

8sx5

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GpppA dinucleotide binding to RNA CU template

SM: G3A G3A

8sx6

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RNA duplex bound with GMP and AMP monomers

SM: 5GP 5GP AMP

8ruh

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Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exon

SM: EPE

8rui

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Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 1h soaking

SM: VTE

8ruj

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Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and ARN25850 after 1h soaking

SM: VTR

8ruk

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Structure of Oceanobacillus iheyensis group II intron in the presence of Na+, Mg2+, and ARN25850

SM: VTR

8rul

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Structure of Oceanobacillus iheyensis group II intron in the presence of Li+ and Mg2+

SM: EPE EPE

8rum

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Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+, and intronistat B

SM: VTE

8run

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Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+, and ARN25850

SM: EPE EPE VTR

8sxl

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RNA UU template binding to AMP monomer

SM: AMP AMP AMP

8sy1

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RNA duplex bound with imidazolium bridged GA dinucleotide

SM: WZW WZW WZW WZW

8syk

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Crystal structure of RNA device 43 truncation mutant 3 (U100C), holo state

SM: TAC TAC TAC TAC

8t5o

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Cryo-EM structure of RNA device 43, holo state

SM: TAC

8toz

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Class III PreQ1 riboswitch double mutant U8C/A85G

SM: PRF

8u5j

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Structure of Mango III variant aptamer bound to T01-07M-B

SM: W6F

8u5k

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Structure of Mango II aptamer bound to T01-6A

SM: VK0 VK0 VK0

8u5p

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Structure of Mango II aptamer bound to T01-6A-B

SM: VKI

8u5t

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Structure of Mango II variant aptamer bound to T01-6A-B

SM: VLR VLR VLR

8u5z

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Structure of Mango II variant aptamer bound to T01-7M-B

SM: W6F W6F

8u60

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Structure of Mango II variant2 aptamer bound to T01-6A

SM: VK0 VK0 VK0

8vaw

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Magnesium catalyzed primer extension product with 14mer primer and mixed phosphorothioate activated G monomer

SM: DGP DGP

8vax

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Cadmium catalyzed primer extension product with 14mer primer and mixed phosphorothioate activated G monomer

SM: DGP DGP

8vpv

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Class III PreQ1 riboswitch mutant delta84

SM: PRF

8vqv

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Structure of S. odontolytica ZTP riboswitch bound to m-1-pyridinyl-AICA

SM: UG4

8vvj

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Structure of S. odontolytica ZTP riboswitch bound to m-1-pyridinyl-AICA

SM: A1AD3