HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8hzk

System information

Experimental technique X-ray
Experimental resolution 2.00
System mass 28.49 kDa
Deposition year 2023
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 8hzk
Reference Huang Kaiyi, Song Qianqian, Fang Mengyue, Yao Deqiang, Shen Xin, Xu Xiaochen, Chen Xianjun, Zhu Linyong, Yang Yi, Ren Aiming. . Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift Nature Chemical Biology

Compound NI4
Residue . / 116
Chain R / A
Non-redundant False
Interacting RNA chains A/A
Volume 481.91 Å3
Hydrophobicity 0.644
Hydrophilicity 1.072
Buriedness 0.666
Don/acc character 1.321
SiteScore 0.979
D Score 0.990

Compound NI4
Residue . / 110
Chain BA / B
Non-redundant False
Interacting RNA chains B/B
Volume 286.40 Å3
Hydrophobicity 0.920
Hydrophilicity 0.902
Buriedness 0.658
Don/acc character 2.735
SiteScore 1.000
D Score 1.041