Complex 8hze
System information
| Experimental technique | X-ray |
| Experimental resolution | 1.59 |
| System mass | 24.82 kDa |
| Deposition year | 2023 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 8hze |
| Reference | Huang Kaiyi, Song Qianqian, Fang Mengyue, Yao Deqiang, Shen Xin, Xu Xiaochen, Chen Xianjun, Zhu Linyong, Yang Yi, Ren Aiming. . Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift Nature Chemical Biology |
| Equivalence Class |
NR_all_04219.3
BGSU version: 4.48 |
| Compound | NI4 |
| Residue | . / 109 |
| Chain | K / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/A: aptamer_rna |
| RNA family global | aptamer_rna |
| Volume | 332.37 Å3 |
| Hydrophobicity | 0.847 |
| Hydrophilicity | 0.841 |
| Buriedness | 0.642 |
| Don/acc character | 2.928 |
| SiteScore | 1.151 |
| D Score | 1.051 |
| Kd | — |
| Compound | NI4 |
| Residue | . / 109 |
| Chain | T / B |
| Non-redundant | True |
| Interacting RNA chains | A/A, B/B |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/A: aptamer_rna, B/B: aptamer_rna |
| RNA family global | aptamer_rna |
| Volume | 535.42 Å3 |
| Hydrophobicity | 0.852 |
| Hydrophilicity | 0.803 |
| Buriedness | 0.642 |
| Don/acc character | 4.235 |
| SiteScore | 1.158 |
| D Score | 1.063 |
| Kd | — |