HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8vax

System information

Experimental technique X-ray
Experimental resolution 1.42
System mass 10.56 kDa
Deposition year 2023
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 8vax
Reference Fang Ziyuan, Pazienza Lydia T., Zhang Jian, Tam Chun Pong, Szostak Jack W.. . Catalytic Metal Ion–Substrate Coordination during Nonenzymatic RNA Primer Extension Journal of the American Chemical Society
Equivalence Class NR_all_16232.7
BGSU version: 4.49

Compound DGP
Residue . / 101
Chain E / BBB
Non-redundant True
Interacting RNA chains B/BBB, A/AAA
RNA environment detailled ion
RNA environment global RNA
RNA family chains A/AAA: synthetic construct, B/BBB: synthetic construct
RNA family global synthetic construct
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd

Compound DGP
Residue . / 102
Chain F / BBB
Non-redundant True
Interacting RNA chains B/BBB, A/AAA
RNA environment detailled ion
RNA environment global RNA
RNA family chains A/AAA: synthetic construct, B/BBB: synthetic construct
RNA family global synthetic construct
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd