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Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

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2077 RNA-SM complexes found
Structure of complex 9ljf

9ljf

Cryo-EM structure of the dGTP bound DRT2-ncRNA complex

SM: DGT

Structure of complex 9ljr

9ljr

Structural insights into the polymerase catalyzed FAD-capping of hepatitis C viral RNA

SM: CDP FAD

Structure of complex 9ljs

9ljs

Structural insights into the polymerase catalyzed FAD-capping of hepatitis C viral RNA

SM: CDP FAD

Structure of complex 9ljt

9ljt

Structural insights into the polymerase catalyzed FAD-capping of hepatitis C viral RNA

SM: CDP FAD

Structure of complex 9lju

9lju

Structural insights into the polymerase catalyzed FAD-capping of hepatitis C viral RNA

SM: FAD GDP

Structure of complex 9ljv

9ljv

Structural insights into the polymerase catalyzed FAD-capping of hepatitis C viral RNA

SM: C5P FAD

Structure of complex 9ljw

9ljw

Structural insights into the polymerase catalyzed FAD-capping of hepatitis C viral RNA

SM: GDP

Structure of complex 9lkc

9lkc

Crystal structure of Guanine-II riboswitch in complex with 2'-deoxyguanosine

SM: GNG

Structure of complex 9lkf

9lkf

Crystal structure of Guanine-II riboswitch in complex with guanosine

SM: GMP

Structure of complex 9lkt

9lkt

Human RNA Polymerase III de novo transcribing complex 10 (TC10)

SM: 3AT

Structure of complex 9lku

9lku

Crystal structure of the 2'-dG-III riboswitch bound to Guanosine

SM: GMP

Structure of complex 9lkv

9lkv

Crystal structure of the 2'-dG-III riboswitch bound to 2'-dG

SM: GNG

Structure of complex 9lxo

9lxo

Human RNA Polymerase III de novo transcribing complex 6 (TC6)(without 3'dATP)

SM: GTP

Structure of complex 9mkk

9mkk

Structure of arbekacin bound Escherichia coli 70S ribosome

SM: 84G 84G

Structure of complex 9mn6

9mn6

Structure of the human mitochondrial late-stage transcription initiation complex, IC8

SM: ATP

Structure of complex 9mn7

9mn7

Structure of the human mitochondrial late-stage transcription initiation complex, IC8

SM: ATP

Structure of complex 9mn8

9mn8

Structure of the human mitochondrial transcription initiation transitional complex, TC8

SM: ATP

Structure of complex 9mn9

9mn9

Structure of the human mitochondrial promoter-initiated transcription elongation complex, P-EC13

SM: CH1

Structure of complex 9mna

9mna

Structure of the human mitochondrial promoter-initiated transcription elongation complex with TEFM, pEC9-TEFM

SM: ATP

Structure of complex 9mnc

9mnc

Human 80S ribosome bound to small molecule SW393071

SM: A1BNL B3P

Structure of complex 9mqs

9mqs

CryoEM Structure of the Candida albicans Group I Intron-GMP Complex

SM: 5GP

Structure of complex 9mqt

9mqt

CryoEM Structure of the Candida albicans Group I Intron-Compound 11 Complex under Magnesium Condition

SM: A1BNU

Structure of complex 9mqu

9mqu

CryoEM Structure of the Candida albicans Group I Intron-Compound 11 Complex under Calcium Condition

SM: A1BNU

Structure of complex 9muj

9muj

RlmR 23S rRNA methyltransferase from Thermus thermophilus in complex with methylated rRNA (Um2552) and S-adenosyl-L-homocysteine (SAH)

SM: SAH

Structure of complex 9n2b

9n2b

Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)

SM: ATP ATP

Structure of complex 9n2c

9n2c

Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)

SM: ATP ATP

Structure of complex 9n5c

9n5c

RNA polymerase II elongation complex with 8-oxoG at +1 site, CMPCPP-bound

SM: 2TM

Structure of complex 9n5e

9n5e

RNA polymerase II elongation complex with 8-oxoG at +1 site, AMPCPP in E-site

SM: APC

Structure of complex 9n5g

9n5g

RNA polymerase II elongation complex with 8-oxoG at +1 site, ATP in both A- and E-site

SM: ATP

Structure of complex 9n5t

9n5t

Mycobacterium smegmatis 70S ribosome with small molecule drug MK-7762

SM: A1BWO

Structure of complex 9nap

9nap

RNA scaffold attached to Mango in the presence of TO1-biotin

SM: EKJ

Structure of complex 9p72

9p72

In situ human P-E state 80S ribosome

SM: SPM SPM SPM SPM SPM SPM SPM

Structure of complex 9nbc

9nbc

RNA scaffold attached to 8-oxoguanine riboswitch aptamer

SM: OXG

Structure of complex 9ndd

9ndd

RNA scaffold attached to 8-oxoguanine riboswitch aptamer, combined core plus aptamer

SM: OXG OXG OXG OXG

Structure of complex 9ndv

9ndv

Scaffold attached to quinine-I aptamer (Tonic) local refinement of aptamer

SM: QI9

Structure of complex 9ndx

9ndx

Scaffold attached to quinine-I aptamer (Tonic) refinement of aptamer and core

SM: QI9 QI9

Structure of complex 9nl2

9nl2

Structure of R2 retrotransposon protein from Platysternon megacephalum initiating target-primed reverse transcription

SM: TTP

Structure of complex 9nl3

9nl3

Structure of R2 retrotransposon protein from Taeniopygia guttata initiating target-primed reverse transcription

SM: TTP

Structure of complex 9o2x

9o2x

Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (S)-betahydroxyBocK charged NH-tRNAPyl

SM: PAR SPM

Structure of complex 9o2y

9o2y

Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPyl

SM: PAR SPM

Structure of complex 9o3h

9o3h

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.65A resolution

SM: ERY ERY

Structure of complex 9o3i

9o3i

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ketolide telithromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.80A resolution

SM: TEL TEL

Structure of complex 9o3k

9o3k

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMAC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.70A resolution

SM: ERY ERY

Structure of complex 9o3l

9o3l

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, deacylated A-site tRNAphe, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAphe at 2.75A resolution

SM: ERY ERY

Structure of complex 9o3w

9o3w

Human 80S ribosome bound to IDB-001 stalled on MYC nascent chain

SM: A1B75

Structure of complex 9o3y

9o3y

Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chain

SM: A1B76

Structure of complex 9ol2

9ol2

RNA-imidazolium-bridged dinucleotide intermediate complex

SM: EQ1 EQ1

Structure of complex 9ol3

9ol3

DNA-imidazolium-bridged dinucleotide intermediate complex

SM: A1CGJ A1CGJ

Structure of complex 9olf

9olf

Membrane-associated human mitoribosome in complex with TACO1

SM: NAD SPM SPM

Structure of complex 9p6p

9p6p

Crystal Structure of the SARS-CoV-2 2'-O-Methyltransferase with (m7GpppA)pUpU (Cap-0) and S-Adenosyl-L-homocysteine (SAH).

SM: SAH SAH

Structure of complex 9p78

9p78

In situ human Hibernating rotate 3 with E-site tRNA state 80S ribosome

SM: SPM SPM SPM SPM SPM SPM SPM

Structure of complex 9p79

9p79

In situ human Hibernating rotate3 with Z site tRNA state 80S ribosome

SM: SPM SPM SPM SPM SPM SPM SPM

Structure of complex 9p7a

9p7a

In situ human hibernating class2 80S ribosome

SM: SPM SPM SPM SPM SPM SPM SPM

Structure of complex 9p7c

9p7c

In situ human Hibernating class3 80S ribosome

SM: SPM SPM SPM SPM SPM SPM SPM

Structure of complex 9p7d

9p7d

In situ human Hibernating class4 80S ribosome

SM: SPM SPM SPM SPM SPM SPM SPM

Structure of complex 9p7e

9p7e

In situ human Hibernating class5 80S ribosome

SM: SPM SPM SPM SPM SPM SPM SPM

Structure of complex 9p7f

9p7f

In situ HHT and CHX treated A-P state 80S ribosome

SM: HMT SPM SPM SPM SPM SPM SPM SPM

Structure of complex 9p7g

9p7g

In situ HHT and CHX treated A-P-Z state 80S ribosome

SM: HMT SPM SPM SPM SPM SPM SPM SPM

Structure of complex 9p7h

9p7h

In situ HHT and CHX treated human eEF1A-A/T-P state 80S ribosome

SM: 3HE HMT SPM SPM SPM SPM SPM SPM SPM

Structure of complex 9p7i

9p7i

In situ HHT and CHX treated human eEF1A-A/T-P-Z state 80S ribosome

SM: 3HE HMT SPM SPM SPM SPM SPM SPM SPM