HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9ljs

System information

Experimental technique X-ray
Experimental resolution 2.96
System mass 64.14 kDa
Deposition year 2025
Molecule type RNA/Protein
# RNA entities 1
Organism N/A
RCSB PDB Entry 9ljs
Reference Wang De-Ping, Zhao Rong, Hu Wen-Shu, Li Hai-Ning, Cao Ji-Min, Zhou Xin, Xiang Ye. . Structural insights into polymerase-catalyzed FAD capping of hepatitis C virus RNA Nature Communications

Compound CDP
Residue . / 602
Chain D / A
Non-redundant False
Interacting RNA chains B/B
Volume 544.68 Å3
Hydrophobicity 0.375
Hydrophilicity 1.454
Buriedness 0.809
Don/acc character 0.469
SiteScore 1.074
D Score 0.952

Compound FAD
Residue . / 601
Chain C / A
Non-redundant False
Interacting RNA chains B/B
Volume 229.12 Å3
Hydrophobicity 1.044
Hydrophilicity 0.726
Buriedness 0.770
Don/acc character 0.656
SiteScore 0.756
D Score 0.714