HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9k38

System information

Experimental technique Electron Microscopy
Experimental resolution 3.10
System mass 789.62 kDa
Deposition year 2024
Molecule type RNA/DNA/Protein
# RNA entities 1
Organism Homo
RCSB PDB Entry 9k38
Reference Wang Qianmin, Ren Yulei, Jin Qianwei, Chen Xizi, Xu Yanhui. . Structural insights into human Pol III transcription initiation in action Nature

Compound 3AT
Residue . / 1202
Chain Z / B
Non-redundant True
Interacting RNA chains U/Z
RNA environment detailled DNA, protein, ion
RNA environment global RNA/DNA/Protein
RNA family chains U/Z: unknown
RNA family global unknown
Volume 760.43 Å3
Hydrophobicity 0.552
Hydrophilicity 1.148
Buriedness 0.800
Don/acc character 1.094
SiteScore 1.068
D Score 1.046
Kd

Compound GTP
Residue . / 101
Chain EA / Z
Non-redundant True
Interacting RNA chains U/Z
RNA environment detailled DNA, protein
RNA environment global RNA/DNA/Protein
RNA family chains U/Z: unknown
RNA family global unknown
Volume 530.62 Å3
Hydrophobicity 0.207
Hydrophilicity 1.274
Buriedness 0.745
Don/acc character 1.198
SiteScore 1.031
D Score 0.972
Kd