HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9ljr

System information

Experimental technique X-ray
Experimental resolution 2.74
System mass 64.10 kDa
Deposition year 2025
Molecule type RNA/Protein
# RNA entities 1
Organism N/A
RCSB PDB Entry 9ljr
Reference Wang De-Ping, Zhao Rong, Hu Wen-Shu, Li Hai-Ning, Cao Ji-Min, Zhou Xin, Xiang Ye. . Structural insights into polymerase-catalyzed FAD capping of hepatitis C virus RNA Nature Communications

Compound CDP
Residue . / 601
Chain C / A
Non-redundant False
Interacting RNA chains B/T
Volume 467.51 Å3
Hydrophobicity 0.315
Hydrophilicity 1.382
Buriedness 0.769
Don/acc character 0.388
SiteScore 1.047
D Score 0.951

Compound FAD
Residue . / 602
Chain D / A
Non-redundant False
Interacting RNA chains B/T
Volume 234.61 Å3
Hydrophobicity 0.914
Hydrophilicity 0.840
Buriedness 0.766
Don/acc character 0.466
SiteScore 0.766
D Score 0.718