HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 9lkv

System information

Experimental technique X-ray
Experimental resolution 2.13
System mass 23.77 kDa
Deposition year 2025
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 9lkv
Reference Shen Xin, Li Hongcheng, Xu Xiaochen, Song Qianqian, Tai Xiaoqing, He Mengqi, Ren Aiming. . Structure-based insights into the ligand specificity tuning of 2′-dG-III riboswitch Nucleic Acids Research
Equivalence Class NR_all_85201.1
BGSU version: 4.48

Compound GNG
Residue . / 101
Chain B / X
Non-redundant True
Interacting RNA chains A/X
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/X: riboswitch
RNA family global riboswitch
Volume 361.18 Å3
Hydrophobicity 0.151
Hydrophilicity 1.271
Buriedness 0.736
Don/acc character 0.807
SiteScore 1.175
D Score 0.967
Kd