HARIBOSS - RNA-SM complexes list

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Cryo-EM structure of DNA polymerase Zeta with RNA:DNA hybrid and incoming dNTP

SM: DCP

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REOVIRUS POLYMERASE LAMBDA-3 LOCALIZED BY ELECTRON CRYOMICROSCOPY OF VIRIONS AT 7.6-A RESOLUTION

SM: CH1

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The structural basis for RNA specificity and Ca2 inhibition of an RNA-dependent RNA polymerase phi6p2 ca2+ inhibition complex

SM: GTP GTP GTP GTP GTP GTP

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pre-miR-6074 internal loop in complex with amiloride (Form 1)

SM: AMR

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pre-miR-6074 internal loop in complex with amiloride (Form 2)

SM: AMR AMR

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SARS-CoV-2 polymerase with incorporated and pre-incorporated AT-9052-Sp

SM: A1ME1

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RNA polymerase II elongation complex in 5 mM Mg+2 with GMPCPP

SM: G2P

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RNA Polymerase II elongation complex with UTP, updated 11/2006

SM: UTP

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RNA-L-G monomer complex

SM: 0G 0G 0G 0G

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RNA-dGMP complex with L-G-terminal primer

SM: DGP DGP DGP DGP DGP DGP DGP DGP

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RNA-dGMP complex

SM: DGP DGP DGP DGP

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Crystal structure of a catalytically active substrate-bound box C/D RNP from Sulfolobus solfataricus

SM: SAH SAH SAH

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RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid and soaked with GMPCPP

SM: G2P

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elongating RNA Polymerase II-Bye1 TLD complex soaked with AMPCPP

SM: APC

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Crystal structure of RNASE III complexed with double-stranded RNA and CMP (TYPE II CLEAVAGE)

SM: C5P C5P

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CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS AND DELTA8 BETA HAIRPIN LOOP DELETION IN COMPLEX WITH UDP, MN2+ AND SYMMETRICAL PRIMER TEMPLATE 5'-CAAAAUUU

SM: UDP

4wtc

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CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS AND DELTA8 BETA HAIRPIN LOOP DELETION IN COMPLEX WITH CDP, MN2+ AND SYMMETRICAL PRIMER TEMPLATE 5'-AGAAAUUU

SM: CDP

4wtd

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CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS AND DELTA8 BETA HAIRPIN LOOP DELETION IN COMPLEX WITH ADP, MN2+ AND SYMMETRICAL PRIMER TEMPLATE 5'-AUAAAUUU

SM: ADP

4wte

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CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS AND DELTA8 BETA HAIRPIN LOOP DELETION IN COMPLEX WITH GDP, MN2+ AND SYMMETRICAL PRIMER TEMPLATE 5'-ACAAAUUU

SM: GDP

4wtf

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CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS AND DELTA8 BETA HAIRPIN LOOP DELETION IN COMPLEX WITH GS-639475, MN2+ AND SYMMETRICAL PRIMER TEMPLATE 5'-CAAAAUUU

SM: 5GS

4wtg

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CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS AND DELTA8 BETA HAIRPIN LOOP DELETION IN COMPLEX WITH SOFOSBUVIR DIPHOSPHATE GS-607596, MN2+ AND SYMMETRICAL PRIMER TEMPLATE 5'-CAAAAUUU

SM: 6GS

4wti

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CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS IN COMPLEX WITH RNA TEMPLATE 5'-ACGG, RNA PRIMER 5'-PCC, MN2+, AND GDP

SM: GDP

4wtj

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CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS IN COMPLEX WITH RNA TEMPLATE 5'-AUCC, RNA PRIMER 5'-PGG, MN2+, AND ADP

SM: ADP

4wtk

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CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS IN COMPLEX WITH RNA TEMPLATE 5'-AGCC, RNA PRIMER 5'-PGG, MN2+, AND CDP

SM: CDP

4wtl

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CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS IN COMPLEX WITH RNA TEMPLATE 5'-UACC, RNA PRIMER 5'-PGG, MN2+, AND UDP

SM: UDP

4wtm

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CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS IN COMPLEX WITH RNA TEMPLATE 5'-UAGG, RNA PRIMER 5'-PCC, MN2+, AND UDP

SM: UDP

4y7n

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The Structure Insight into 5-Carboxycytosine Recognition by RNA Polymerase II during Transcription Elongation.

SM: G2P

5dhb

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Cooperativity and Downstream Binding in RNA Replication

SM: 5GP 5GP 5GP 5GP

5dhc

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Cooperativity and Downstream Binding in RNA Replication

SM: 5GP 5GP 5GP 5GP 5GP 5GP 5GP 5GP

5f8i

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Enterovirus 71 Polymerase Elongation Complex (C1S2/3 Form)

SM: CTP

5hbw

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RNA primer-template complex with 2-methylimidazole-activated monomer analogue

SM: PZG PZG

5hbx

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RNA primer-template complex with 2-methylimidazole-activated monomer analogue-2 binding sites

SM: PZG PZG PZG PZG PZG PZG PZG PZG

5hby

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RNA primer-template complex with 2-methylimidazole-activated monomer analogue-3 binding sites

SM: PZG PZG

5krg

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RNA 15mer duplex binding with PZG monomer

SM: PZG PZG PZG PZG

5l00

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Self-complimentary RNA 15mer binding with GMP monomers

SM: 5GP 5GP 5GP 5GP

5ued

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RNA primer-template complex with guanosine dinucleotide ligand G(5')pp(5')G

SM: 86S 86S

5uee

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RNA primer-template complex with guanosine dinucleotide ligand G(5')ppp(5')G

SM: GP3 GP3

5ueg

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RNA primer-template complex with guanosine dinucleotide G(5')pppp(5')G ligand

SM: 86P 86P 86P 86P

5ux3

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RNA hairpin structure containing 2-MeImpG monomer analogue and 2-MeImp-oligomer analogue

SM: 8OS

5v0h

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RNA duplex with 2-MeImpG analogue bound-one binding site

SM: 8OS 8OS

5v0j

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RNA duplex with 2-MeImpG analogue bound-2 binding sites

SM: 8OS 8OS 8OS 8OS

5v0k

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RNA duplex with 2-MeImpG analogue bound-3 binding sites

SM: 8OS 8OS

5v0o

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RNA hairpin structure containing 2-MeImpG analogue bound

SM: 8OS

5v1l

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Structure of S-GNA dodecamer

SM: SPM

5v9z

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RNA hairpin structure containing 2-MeImpG analogue bound

SM: 8OS

5vcf

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RNA hairpin structure containing tetraloop/receptor motif, complexed with 2-MeImpG analogue

SM: 8OS

5vci

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RNA hairpin structure containing tetraloop/receptor motif, complexed with 2-MeImpG analogue

SM: 8OS

5w0o

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Structure of human TUT7 catalytic module (CM) in complex with dsRNA

SM: UTP UTP

5xog

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RNA Polymerase II elongation complex bound with Spt5 KOW5 and Elf1

SM: APC

5zc9

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Crystal structure of the human eIF4A1-ATP analog-RocA-polypurine RNA complex

SM: RCG

6az4

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RNA hairpin complex with guanosine dinucleotide ligand G(5')ppp(5')G

SM: GP3

6blp

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Pol II elongation complex with an abasic lesion at i+1 position, soaking AMPCPP

SM: APC

6c8d

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RNA-dGMP complex with Mg ion

SM: DGP DGP DGP DGP

6c8e

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RNA-imidazolium-bridged intermediate complex, 4h soaking

SM: EQ1 EQ1

6c8i

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RNA-activated 2-AIpG monomer complex, 5 min soaking

SM: EQ4 EQ4 EQ4 EQ4

6c8j

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RNA-activated 2-AIpG monomer complex, 15 min soaking

SM: EQ4 EQ4 EQ4 EQ4

6c8k

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RNA-activated 2-AIpG monomer complex, 30 min soaking

SM: EQ1 EQ1

6c8l

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RNA-activated 2-AIpG monomer complex, 1h soaking

SM: EQ1 EQ1

6c8m

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RNA-activated 2-AIpG monomer, 1.5h soaking

SM: EQ1

6c8o

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RNA-activated 2-AIpG monomer, 3h soaking

SM: EQ4 EQ4