HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6c8j

System information

Experimental technique X-ray
Experimental resolution 1.50
System mass 10.88 kDa
Deposition year 2018
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 6c8j
Reference Zhang Wen, Walton Travis, Li Li, Szostak Jack W. . Crystallographic observation of nonenzymatic RNA primer extension eLife
Equivalence Class NR_all_01949.9
BGSU version: 4.48

Compound EQ4
Residue . / 101
Chain C / A
Non-redundant True
Interacting RNA chains B/B, A/A
RNA environment detailled other
RNA environment global RNA/Other
RNA family chains A/A: synthetic construct, B/B: synthetic construct
RNA family global synthetic construct
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd —

Compound EQ4
Residue . / 102
Chain D / A
Non-redundant True
Interacting RNA chains B/B, A/A
RNA environment detailled other
RNA environment global RNA/Other
RNA family chains A/A: synthetic construct, B/B: synthetic construct
RNA family global synthetic construct
Volume 24.01 Å3
Hydrophobicity 0.458
Hydrophilicity 0.747
Buriedness 0.472
Don/acc character 2.475
SiteScore 0.539
D Score 0.510
Kd —

Compound EQ4
Residue . / 103
Chain E / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled other
RNA environment global RNA/Other
RNA family chains A/A: synthetic construct
RNA family global synthetic construct
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd —

Compound EQ4
Residue . / 101
Chain K / B
Non-redundant True
Interacting RNA chains B/B
RNA environment detailled other
RNA environment global RNA/Other
RNA family chains B/B: synthetic construct
RNA family global synthetic construct
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -
Kd —