HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3pla

System information

Experimental technique X-ray
Experimental resolution 3.15
System mass 303.29 kDa
Deposition year 2010
Molecule type RNA/Protein
# RNA entities 1
Organism N/A
RCSB PDB Entry 3pla
Reference Lin Jinzhong, Lai Shaomei, Jia Ru, Xu Anbi, Zhang Liman, Lu Jing, Ye Keqiong. . Structural basis for site-specific ribose methylation by box C/D RNA protein complexes Nature

Compound SAH
Residue . / 301
Chain P / E
Non-redundant False
Interacting RNA chains G/G, I/I
Volume 257.94 Å3
Hydrophobicity 0.799
Hydrophilicity 1.312
Buriedness 0.959
Don/acc character 0.795
SiteScore 1.174
D Score 1.088

Compound SAH
Residue . / 301
Chain Q / F
Non-redundant True
Interacting RNA chains H/H, J/J
Volume 262.05 Å3
Hydrophobicity 0.724
Hydrophilicity 1.360
Buriedness 0.960
Don/acc character 0.870
SiteScore 1.175
D Score 1.073

Compound SAH
Residue . / 301
Chain R / M
Non-redundant False
Interacting RNA chains O/O, N/N
Volume 253.82 Å3
Hydrophobicity 0.938
Hydrophilicity 1.377
Buriedness 0.963
Don/acc character 0.785
SiteScore 1.177
D Score 1.069