HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 5dhb

System information

Experimental technique X-ray
Experimental resolution 1.80
System mass 10.43 kDa
Deposition year 2015
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 5dhb
Reference Zhang Wen, Tam Chun Pong, Wang Jiawei, Szostak Jack W.. . Unusual Base-Pairing Interactions in Monomer–Template Complexes ACS Central Science

Compound 5GP
Residue . / 101
Chain E / A
Non-redundant True
Interacting RNA chains A/A, B/B, D/D
Volume 24.70 Å3
Hydrophobicity 0.186
Hydrophilicity 0.702
Buriedness 0.471
Don/acc character 1.882
SiteScore 0.455
D Score 0.406

Compound 5GP
Residue . / 101
Chain F / B
Non-redundant True
Interacting RNA chains A/A, B/B
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound 5GP
Residue . / 101
Chain G / C
Non-redundant True
Interacting RNA chains C/C, B/B, D/D
Volume 27.44 Å3
Hydrophobicity 0.210
Hydrophilicity 0.896
Buriedness 0.503
Don/acc character 1.840
SiteScore 0.458
D Score 0.386

Compound 5GP
Residue . / 101
Chain H / D
Non-redundant True
Interacting RNA chains C/C, D/D
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -