HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 5dhb

System information

Experimental technique X-ray
Experimental resolution 1.80
System mass 10.43 kDa
Deposition year 2015
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 5dhb
Reference Zhang Wen, Tam Chun Pong, Wang Jiawei, Szostak Jack W.. . Unusual Base-Pairing Interactions in Monomer–Template Complexes ACS Central Science

Compound 5GP
Residue . / 101
Chain E / A
Non-redundant False
Interacting RNA chains A/A, D/D, B/B
Volume 25.38 Å3
Hydrophobicity 0.106
Hydrophilicity 0.719
Buriedness 0.460
Don/acc character 3.099
SiteScore 0.434
D Score 0.380

Compound 5GP
Residue . / 101
Chain F / B
Non-redundant False
Interacting RNA chains A/A, B/B
Volume 24.01 Å3
Hydrophobicity 0.000
Hydrophilicity 0.686
Buriedness 0.395
Don/acc character 3.170
SiteScore 0.434
D Score 0.401

Compound 5GP
Residue . / 101
Chain G / C
Non-redundant False
Interacting RNA chains D/D, B/B, C/C
Volume 25.04 Å3
Hydrophobicity 0.157
Hydrophilicity 0.875
Buriedness 0.507
Don/acc character 1.680
SiteScore 0.455
D Score 0.383

Compound 5GP
Residue . / 101
Chain H / D
Non-redundant False
Interacting RNA chains D/D, C/C
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -