Harnessing RIBOnucleic acid - Small molecules Structures
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RNA-activated 2-AIpG monomer, 3h soaking
SM: EQ4 EQ4
RNA-dGMP complex with Sr ion
SM: 5GP 5GP 5GP 5GP
Crystal structure of the L.Lactis YkoY riboswitch bound to cadmium
SM: GTP GTP
Crystal structure of ykoY-alx riboswitch chimera bound to cadmium
Crystal structure of ykoY-mntP riboswitch chimera bound to cadmium
SM: GTP
Crystal structure of a group II intron lariat with an intact 3' splice site (pre-2s state)
SM: SPM
G96A mutant of the PRPP riboswitch from T. mathranii bound to ppGpp
SM: G4P G4P G4P G4P GTP
PRPP riboswitch from T. mathranii bound to PRPP
SM: PRP PRP
PRPP Riboswitch bound to PRPP, manganese chloride soaked structure
SM: PRP
PRPP Riboswitch bound to PRPP, iridium-hexamine soaked structure
PRPP Riboswitch bound to PRPP, thallium acetate soaked structure
PRPP Riboswitch bound to PRPP, native structure
ppGpp Riboswitch bound to ppGpp, native structure
SM: G4P G4P
ppGpp Riboswitch bound to ppGpp, manganese chloride structure
ppGpp Riboswitch bound to ppGpp, thallium acetate structure
SM: G4P
CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1151 SPLIT RNA
SM: GZ7
CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1354 SPLIT RNA
SM: GZG
CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1555 SPLIT RNA
SM: GZ4
Structure of Human pir-miRNA-320b-2 Apical Loop and One-base-pair Stem Fused to the YdaO Riboswitch Scaffold
SM: 2BA 2BA 5GP
Crystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 1: 2-[(dibenzo[b,d]furan-2-yl)oxy]ethan-1-amine
SM: HLV
SM: HLV MES
Crystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 2: 2-[(dibenzo[b,d]furan-2-yl)oxy]-N,N-dimethylethan-1-amine
SM: HMJ
Crystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 3: 2-[(9H-carbazol-3-yl)oxy]-N,N-dimethylethan-1-amine
SM: HMV
Crystal structure of a class I PreQ1 riboswitch complexed with PreQ1
SM: HNG
Crystal structure of the Corn aptamer in complex with ThT
SM: TFX
Crystal structure of the Corn aptamer mutant A14U in complex with ThT
Crystal structure of the Corn aptamer in complex with TO
SM: J0D
Structure of the iMango-III aptamer bound to TO1-Biotin
SM: EKJ EKJ SPM
Structure of the Mango-III (A10U) aptamer bound to TO1-Biotin
SM: HZG HZG HZG HZG
SM: HZD
Crystal structure of the metY SAM V riboswitch
SM: SAM
Lariat-capping ribozyme with a shortened DP2 stem loop
SM: MES
Lariat-capping ribozyme (circular permutation form)
Solution NMR structure of the tetramethylrhodamine (TMR) aptamer 3 in complex with 5-TAMRA
SM: FH8
The structure of the SAM/SAH-binding riboswitch.
SM: SAH
The structure of the G. violaceus guanidine II riboswitch P2 stem-loop with arcaine
SM: FXQ
The structure of the G. violaceus guanidine II riboswitch P2 stem-loop with audouine
SM: FXT
Solution structure of the RNA duplex formed by the 5'-end of U1snRNA and the 5'-splice site of SMN2 exon7 in complex with the SMN-C5 splicing modifier
SM: GDZ
Structure of Human pir-miRNA-378a Apical Loop Fused to the YdaO Riboswitch Scaffold
SM: 2BA 2BA
Solution structure of the complex of naphthyridine carbamate dimer and an RNA with UGGAA-UGGAA pentad
SM: B2R B2R
Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)
SM: V71
Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (equatorial 4'-F)
SM: S81
Crystal structure of a two-quartet RNA parallel G-quadruplex complexed with the porphyrin TMPyP4
SM: POH POH
Crystal structure of a two-quartet RNA parallel G-quadruplex complexed with the porphyrin TMPyP4 (1:1)
SM: POH
Structure of Human pir-miRNA-449c Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold
Structure of Human pir-miRNA-208a Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold
Structure of Human pir-miRNA-202 Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold
Structure of Human pir-miRNA-340 Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold
Structure of Human pir-miRNA-378a Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold
Co-crystal structure of the Fusobacterium ulcerans ZTP riboswitch using an X-ray free-electron laser
SM: AMZ AMZ
Structural basis for 2'-deoxyguanosine recognition by the 2'-dG-II class of riboswitches
SM: GNG
Structure of the iMango-III fluorescent aptamer at room temperature.
SM: OXV
X-ray crystal structure of the tetrahydrofolate riboswitch aptamer bound to 5-deazatetrahydropterin
SM: T0A T0A
Crystal structure of seleno-derivative CAG repeats with synthetic CMBL3a compound
SM: J48 J48
Crystal structure of CAG repeats with synthetic CMBL3a compound (model I)
SM: J48 J48 J48 J48
Crystal structure of CAG repeats with synthetic CMBL3b compound
Crystal structure of seleno-derivative CAG repeats with synthetic CMBL4 compound
SM: J4H
RNA-monomer complex containing pyrophosphate linkage
Metabolite-bound PreQ1 riboswitch with Mn2+
SM: PRF
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Filter entries " Experimental resolution " between the two values. Global DB range: 0.6 – 11.2
Filter entries " Molecular weight (compound) " between the two values. Global DB range: 150 – 1000
Filter entries " Deposition date " between the two values. Global DB range: 1986 – 2027
Filter entries " Molecular weight (complex) " between the two values. Global DB range: 0 – 13090
Filter entries " Number of atoms " between the two values. Global DB range: 5 – 70
Filter entries " Number of interacting chains " between the two values. Global DB range: 1 – 4
Filter entries " Pocket size " between the two values. Global DB range: 15.9 – 394.0
Filter entries " SiteScore " between the two values. Global DB range: 0.3 – 1.3
Filter entries " Dscore " between the two values. Global DB range: -0.1 – 1.4
Filter entries " Exposure " between the two values. Global DB range: 0.1 – 1.0
Filter entries " Enclosure " between the two values. Global DB range: 0.3 – 1.0
Filter entries " Hydrophobicity " between the two values. Global DB range: 0.0 – 3.1
Filter entries " Hydrophilicity " between the two values. Global DB range: 0.2 – 2.8
Filter entries " Donor/Acceptor " between the two values. Global DB range: 0.0 – 5.0
Filter entries " Volume " between the two values. Global DB range: 21.2 – 1528.8