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Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

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618 RNA-SM complexes found
filters used:  Molecule type: RNA  
Structure of complex 6c8o

6c8o

RNA-activated 2-AIpG monomer, 3h soaking

SM: EQ4 EQ4

Structure of complex 6cab

6cab

RNA-dGMP complex with Sr ion

SM: 5GP 5GP 5GP 5GP

Structure of complex 6cb3

6cb3

Crystal structure of the L.Lactis YkoY riboswitch bound to cadmium

SM: GTP GTP

Structure of complex 6cc1

6cc1

Crystal structure of ykoY-alx riboswitch chimera bound to cadmium

SM: GTP GTP

Structure of complex 6cc3

6cc3

Crystal structure of ykoY-mntP riboswitch chimera bound to cadmium

SM: GTP

Structure of complex 6chr

6chr

Crystal structure of a group II intron lariat with an intact 3' splice site (pre-2s state)

SM: SPM

Structure of complex 6ck4

6ck4

G96A mutant of the PRPP riboswitch from T. mathranii bound to ppGpp

SM: G4P G4P G4P G4P GTP

Structure of complex 6ck5

6ck5

PRPP riboswitch from T. mathranii bound to PRPP

SM: PRP PRP

Structure of complex 6dlq

6dlq

PRPP Riboswitch bound to PRPP, manganese chloride soaked structure

SM: PRP

Structure of complex 6dlr

6dlr

PRPP Riboswitch bound to PRPP, iridium-hexamine soaked structure

SM: PRP

Structure of complex 6dls

6dls

PRPP Riboswitch bound to PRPP, thallium acetate soaked structure

SM: PRP

Structure of complex 6dlt

6dlt

PRPP Riboswitch bound to PRPP, native structure

SM: PRP

Structure of complex 6dmc

6dmc

ppGpp Riboswitch bound to ppGpp, native structure

SM: G4P G4P

Structure of complex 6dmd

6dmd

ppGpp Riboswitch bound to ppGpp, manganese chloride structure

SM: G4P G4P

Structure of complex 6dme

6dme

ppGpp Riboswitch bound to ppGpp, thallium acetate structure

SM: G4P

Structure of complex 6dn1

6dn1

CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1151 SPLIT RNA

SM: GZ7

Structure of complex 6dn2

6dn2

CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1354 SPLIT RNA

SM: GZG

Structure of complex 6dn3

6dn3

CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1555 SPLIT RNA

SM: GZ4

Structure of complex 6n5s

6n5s

Structure of Human pir-miRNA-320b-2 Apical Loop and One-base-pair Stem Fused to the YdaO Riboswitch Scaffold

SM: 2BA 2BA 5GP

Structure of complex 6e1s

6e1s

Crystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 1: 2-[(dibenzo[b,d]furan-2-yl)oxy]ethan-1-amine

SM: HLV

Structure of complex 6e1t

6e1t

Crystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 1: 2-[(dibenzo[b,d]furan-2-yl)oxy]ethan-1-amine

SM: HLV MES

Structure of complex 6e1u

6e1u

Crystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 2: 2-[(dibenzo[b,d]furan-2-yl)oxy]-N,N-dimethylethan-1-amine

SM: HMJ

Structure of complex 6e1v

6e1v

Crystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 3: 2-[(9H-carbazol-3-yl)oxy]-N,N-dimethylethan-1-amine

SM: HMV

Structure of complex 6e1w

6e1w

Crystal structure of a class I PreQ1 riboswitch complexed with PreQ1

SM: HNG

Structure of complex 6e81

6e81

Crystal structure of the Corn aptamer in complex with ThT

SM: TFX

Structure of complex 6e82

6e82

Crystal structure of the Corn aptamer mutant A14U in complex with ThT

SM: TFX

Structure of complex 6e84

6e84

Crystal structure of the Corn aptamer in complex with TO

SM: J0D

Structure of complex 6e8s

6e8s

Structure of the iMango-III aptamer bound to TO1-Biotin

SM: EKJ EKJ SPM

Structure of complex 6e8t

6e8t

Structure of the Mango-III (A10U) aptamer bound to TO1-Biotin

SM: HZG HZG HZG HZG

Structure of complex 6e8u

6e8u

Structure of the Mango-III (A10U) aptamer bound to TO1-Biotin

SM: HZD

Structure of complex 6fz0

6fz0

Crystal structure of the metY SAM V riboswitch

SM: SAM

Structure of complex 6g7z

6g7z

Lariat-capping ribozyme with a shortened DP2 stem loop

SM: MES

Structure of complex 6gyv

6gyv

Lariat-capping ribozyme (circular permutation form)

SM: MES

Structure of complex 6gzk

6gzk

Solution NMR structure of the tetramethylrhodamine (TMR) aptamer 3 in complex with 5-TAMRA

SM: FH8

Structure of complex 6gzr

6gzr

Solution NMR structure of the tetramethylrhodamine (TMR) aptamer 3 in complex with 5-TAMRA

SM: FH8

Structure of complex 6hag

6hag

The structure of the SAM/SAH-binding riboswitch.

SM: SAH

Structure of complex 6hbt

6hbt

The structure of the G. violaceus guanidine II riboswitch P2 stem-loop with arcaine

SM: FXQ

Structure of complex 6hc5

6hc5

The structure of the G. violaceus guanidine II riboswitch P2 stem-loop with audouine

SM: FXT

Structure of complex 6hmo

6hmo

Solution structure of the RNA duplex formed by the 5'-end of U1snRNA and the 5'-splice site of SMN2 exon7 in complex with the SMN-C5 splicing modifier

SM: GDZ

Structure of complex 6n5t

6n5t

Structure of Human pir-miRNA-378a Apical Loop Fused to the YdaO Riboswitch Scaffold

SM: 2BA 2BA

Structure of complex 6izp

6izp

Solution structure of the complex of naphthyridine carbamate dimer and an RNA with UGGAA-UGGAA pentad

SM: B2R B2R

Structure of complex 6jbf

6jbf

Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)

SM: V71

Structure of complex 6jbg

6jbg

Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (equatorial 4'-F)

SM: S81

Structure of complex 6jjh

6jjh

Crystal structure of a two-quartet RNA parallel G-quadruplex complexed with the porphyrin TMPyP4

SM: POH POH

Structure of complex 6jji

6jji

Crystal structure of a two-quartet RNA parallel G-quadruplex complexed with the porphyrin TMPyP4 (1:1)

SM: POH

Structure of complex 6n5k

6n5k

Structure of Human pir-miRNA-449c Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold

SM: 2BA 2BA

Structure of complex 6n5n

6n5n

Structure of Human pir-miRNA-208a Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold

SM: 2BA 2BA

Structure of complex 6n5o

6n5o

Structure of Human pir-miRNA-202 Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold

SM: 2BA 2BA

Structure of complex 6n5p

6n5p

Structure of Human pir-miRNA-340 Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold

SM: 2BA 2BA

Structure of complex 6n5q

6n5q

Structure of Human pir-miRNA-378a Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold

SM: 2BA 2BA

Structure of complex 6od9

6od9

Co-crystal structure of the Fusobacterium ulcerans ZTP riboswitch using an X-ray free-electron laser

SM: AMZ AMZ

Structure of complex 6p2h

6p2h

Structural basis for 2'-deoxyguanosine recognition by the 2'-dG-II class of riboswitches

SM: GNG

Structure of complex 6pq7

6pq7

Structure of the iMango-III fluorescent aptamer at room temperature.

SM: OXV

Structure of complex 6q57

6q57

X-ray crystal structure of the tetrahydrofolate riboswitch aptamer bound to 5-deazatetrahydropterin

SM: T0A T0A

Structure of complex 6qiq

6qiq

Crystal structure of seleno-derivative CAG repeats with synthetic CMBL3a compound

SM: J48 J48

Structure of complex 6qir

6qir

Crystal structure of CAG repeats with synthetic CMBL3a compound (model I)

SM: J48 J48 J48 J48

Structure of complex 6qit

6qit

Crystal structure of CAG repeats with synthetic CMBL3b compound

SM: J48 J48 J48 J48

Structure of complex 6qiv

6qiv

Crystal structure of seleno-derivative CAG repeats with synthetic CMBL4 compound

SM: J4H

Structure of complex 6u6j

6u6j

RNA-monomer complex containing pyrophosphate linkage

SM: EQ4 EQ4

Structure of complex 6vui

6vui

Metabolite-bound PreQ1 riboswitch with Mn2+

SM: PRF