Complex 6dlt
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.90 |
| System mass | 35.43 kDa |
| Deposition year | 2018 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Syntrophothermus |
| RCSB PDB Entry | 6dlt |
| Reference | Peselis Alla, Serganov Alexander. . ykkC riboswitches employ an add-on helix to adjust specificity for polyanionic ligands Nature Chemical Biology |
| Equivalence Class |
NR_all_98802.3
BGSU version: 4.48 |
| Compound | PRP |
| Residue | . / 207 |
| Chain | H / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/A: riboswitch |
| RNA family global | riboswitch |
| Volume | 741.57 Å3 |
| Hydrophobicity | 0.005 |
| Hydrophilicity | 1.768 |
| Buriedness | 0.796 |
| Don/acc character | 0.714 |
| SiteScore | 1.216 |
| D Score | 0.841 |
| Kd | 59.2uM |