Complex 6e8u
System information
| Experimental technique | X-ray |
| Experimental resolution | 1.55 |
| System mass | 13.01 kDa |
| Deposition year | 2018 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 6e8u |
| Reference | Trachman Robert J., Autour Alexis, Jeng Sunny C. Y., Abdolahzadeh Amir, Andreoni Alessio, Cojocaru Razvan, Garipov Ramil, Dolgosheina Elena V., Knutson Jay R., Ryckelynck Michael, Unrau Peter J., Ferré-D’Amaré Adrian R.. . Structure and functional reselection of the Mango-III fluorogenic RNA aptamer Nature Chemical Biology |
| Equivalence Class |
NR_all_30516.3
BGSU version: 4.48 |
| Compound | HZD |
| Residue | . / 106 |
| Chain | G / B |
| Non-redundant | True |
| Interacting RNA chains | A/B |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/B: aptamer_rna |
| RNA family global | aptamer_rna |
| Volume | 227.07 Å3 |
| Hydrophobicity | 1.162 |
| Hydrophilicity | 0.579 |
| Buriedness | 0.589 |
| Don/acc character | 4.227 |
| SiteScore | 1.166 |
| D Score | 1.104 |
| Kd | 4.6nM |