HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6e1s

System information

Experimental technique X-ray
Experimental resolution 1.80
System mass 10.56 kDa
Deposition year 2018
Molecule type RNA
# RNA entities 1
Organism Caldanaerobacter
RCSB PDB Entry 6e1s
Reference Connelly Colleen M., Numata Tomoyuki, Boer Robert E., Moon Michelle H., Sinniah Ranu S., Barchi Joseph J., Ferré-D’Amaré Adrian R., Schneekloth John S.. . Synthetic ligands for PreQ1 riboswitches provide structural and mechanistic insights into targeting RNA tertiary structure Nature Communications
Equivalence Class NR_all_80276.6
BGSU version: 4.48

Compound HLV
Residue . / 101
Chain B / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/A: riboswitch
RNA family global riboswitch
Volume 171.84 Å3
Hydrophobicity 1.342
Hydrophilicity 0.748
Buriedness 0.655
Don/acc character 2.568
SiteScore 1.070
D Score 0.952
Kd