Complex 6e1u
System information
| Experimental technique | X-ray |
| Experimental resolution | 1.94 |
| System mass | 10.61 kDa |
| Deposition year | 2018 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Caldanaerobacter |
| RCSB PDB Entry | 6e1u |
| Reference | Connelly Colleen M., Numata Tomoyuki, Boer Robert E., Moon Michelle H., Sinniah Ranu S., Barchi Joseph J., Ferré-D’Amaré Adrian R., Schneekloth John S.. . Synthetic ligands for PreQ1 riboswitches provide structural and mechanistic insights into targeting RNA tertiary structure Nature Communications |
| Equivalence Class |
NR_all_80276.6
BGSU version: 4.48 |
| Compound | HMJ |
| Residue | . / 101 |
| Chain | B / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/A: riboswitch |
| RNA family global | riboswitch |
| Volume | 168.41 Å3 |
| Hydrophobicity | 1.004 |
| Hydrophilicity | 0.781 |
| Buriedness | 0.610 |
| Don/acc character | 2.114 |
| SiteScore | 1.076 |
| D Score | 0.968 |
| Kd | — |