Complex 6ck4
System information
Experimental technique | X-ray |
Experimental resolution | 3.10 |
System mass | 155.11 kDa |
Deposition year | 2018 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | Thermoanaerobacter |
RCSB PDB Entry | 6ck4 |
Reference | Knappenberger Andrew John, Reiss Caroline Wetherington, Strobel Scott A. . Structures of two aptamers with differing ligand specificity reveal ruggedness in the functional landscape of RNA eLife |
Compound | G4P |
Residue | . / 214 |
Chain | R / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 312.82 Å3 |
Hydrophobicity | 0.398 |
Hydrophilicity | 0.977 |
Buriedness | 0.633 |
Don/acc character | 0.551 |
SiteScore | 0.904 |
D Score | 0.918 |
Compound | G4P |
Residue | . / 208 |
Chain | Z / B |
Non-redundant | False |
Interacting RNA chains | B/B |
Volume | 323.45 Å3 |
Hydrophobicity | 0.409 |
Hydrophilicity | 1.054 |
Buriedness | 0.663 |
Don/acc character | 0.576 |
SiteScore | 0.977 |
D Score | 0.994 |
Compound | G4P |
Residue | . / 211 |
Chain | KA / C |
Non-redundant | True |
Interacting RNA chains | C/C |
Volume | 85.06 Å3 |
Hydrophobicity | 0.364 |
Hydrophilicity | 0.898 |
Buriedness | 0.599 |
Don/acc character | 0.229 |
SiteScore | 0.714 |
D Score | 0.690 |
Compound | G4P |
Residue | . / 211 |
Chain | WA / D |
Non-redundant | False |
Interacting RNA chains | D/D |
Volume | 75.46 Å3 |
Hydrophobicity | 0.611 |
Hydrophilicity | 0.704 |
Buriedness | 0.594 |
Don/acc character | 0.879 |
SiteScore | 0.708 |
D Score | 0.699 |
Compound | GTP |
Residue | . / 201 |
Chain | E / A |
Non-redundant | True |
Interacting RNA chains | A/A |
Volume | 196.88 Å3 |
Hydrophobicity | 0.081 |
Hydrophilicity | 1.233 |
Buriedness | 0.649 |
Don/acc character | 2.554 |
SiteScore | 0.674 |
D Score | 0.552 |