Complex 6ck4
System information
Experimental technique | X-ray |
Experimental resolution | 3.10 |
System mass | 155.11 kDa |
Deposition year | 2018 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | Thermoanaerobacter |
RCSB PDB Entry | 6ck4 |
Reference | Knappenberger Andrew John, Reiss Caroline Wetherington, Strobel Scott A. . Structures of two aptamers with differing ligand specificity reveal ruggedness in the functional landscape of RNA eLife |
Compound | G4P |
Residue | . / 214 |
Chain | R / A |
Non-redundant | False |
Interacting RNA chains | A/A |
Volume | 321.39 Å3 |
Hydrophobicity | 0.285 |
Hydrophilicity | 1.086 |
Buriedness | 0.631 |
Don/acc character | 1.010 |
SiteScore | 0.921 |
D Score | 0.921 |
Compound | G4P |
Residue | . / 208 |
Chain | Z / B |
Non-redundant | True |
Interacting RNA chains | B/B |
Volume | 336.48 Å3 |
Hydrophobicity | 0.281 |
Hydrophilicity | 1.217 |
Buriedness | 0.660 |
Don/acc character | 1.429 |
SiteScore | 0.975 |
D Score | 0.939 |
Compound | G4P |
Residue | . / 211 |
Chain | KA / C |
Non-redundant | True |
Interacting RNA chains | C/C |
Volume | 139.60 Å3 |
Hydrophobicity | 0.289 |
Hydrophilicity | 1.124 |
Buriedness | 0.613 |
Don/acc character | 0.735 |
SiteScore | 0.819 |
D Score | 0.782 |
Compound | G4P |
Residue | . / 211 |
Chain | WA / D |
Non-redundant | False |
Interacting RNA chains | D/D |
Volume | 75.46 Å3 |
Hydrophobicity | 0.460 |
Hydrophilicity | 0.778 |
Buriedness | 0.595 |
Don/acc character | 1.376 |
SiteScore | 0.712 |
D Score | 0.698 |
Compound | GTP |
Residue | . / 201 |
Chain | E / A |
Non-redundant | True |
Interacting RNA chains | A/A |
Volume | 199.63 Å3 |
Hydrophobicity | 0.087 |
Hydrophilicity | 1.034 |
Buriedness | 0.649 |
Don/acc character | 1.385 |
SiteScore | 0.688 |
D Score | 0.632 |