Harnessing RIBOnucleic acid - Small molecules Structures
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Structure of Oceanobacillus iheyensis group II intron G-mutant (C289G/C358G/G385C) in the presence of K+, Mg2+ and 5'-exon
SM: EPE EPE EPE SPM SPM
Structure of Oceanobacillus iheyensis group II intron G-mutant (C289G/C358G/G385C) in the presence of Na+, Mg2+ and 5'-exon
SM: EPE EPE EPE
Structure of Oceanobacillus iheyensis group II intron U-mutant (C289U/C358U/G385A) in the presence of K+, Mg2+ and 5'-exon
SM: EPE EPE SPM SPM
Structure of Oceanobacillus iheyensis group II intron U-mutant (C289U/C358U/G385A) in the presence of Na+, Mg2+ and 5'-exon
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine monophosphate (AMP)
SM: AMP
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide, reduced (NADH)
SM: NAI
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine diphosphate (ADP)
SM: ADP
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine 5-triphosphate (ATP)
SM: ATP
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Cordycepin 5-triphosphate (3-dATP)
SM: 3AT
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with N6-Methyl-adenosine-5'-triphosphate (m6ATP)
SM: N6E
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide (NAD+)
SM: NAD
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine 3-phosphate 5-phosphosulfate (APPS)
SM: PPS
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Nicotinamide adenine dinucleotide, reduced (NADH); soaking with Manganese(II) (Mn2+)
RNA hairpin structure containing one TNA nucleotide as template
SM: C5P
RNA hairpin structure containing one TNA nucleotide as primer
RNA duplex, bound with TNA monomer
SM: TG TG
RNA hairpin, bound with TNA monomer
SM: TG
RNA duplex bound with TNA 3'-3' imidazolium dimer
SM: Q1V Q1V
Structure of guanine riboswitch bound to N2-acetyl guanine
SM: Q44
Guanine riboswitch bound to 8-aminoguanine
SM: ANG
Guanine riboswitch bound to O6-cyclohexylmethyl guanine
SM: CMG
SAM-bound SAM-IV riboswitch
SM: SAM
Structure of the Mango-III fluorescent aptamer bound to YO3-Biotin
SM: YO3 YO3
Co-crystal structure of the fluorogenic Mango-IV homodimer bound to TO1-Biotin
SM: QSA QSA QSA
SM: QW4 QW4 QW4
Solution Structure of the Tau pre-mRNA Exon 10 Splicing Regulatory Element Bound to MH5
SM: QSV
Solution Structure of the Tau pre-mRNA Exon 10 Splicing Regulatory Element Bound to MQC
SM: MQC
Solution Structure of the Tau pre-mRNA Exon 10 Splicing Regulatory Element Bound to MIP
SM: QSY
Structure of Human pir-miRNA-19b-2 Apical Loop and One-base-pair Fused to the YdaO Riboswitch Scaffold
SM: 2BA 2BA
Structure of Human pir-miRNA-300 Apical Loop Fused to the YdaO Riboswitch Scaffold
Fusibacterium ulcerans ZTP riboswitch bound to p-1-pyridinyl AICA
SM: UG1 UG1
Fusibacterium ulcerans ZTP riboswitch bound to m-1-pyridinyl AICA
SM: UG4 UG4
IRES-targeting Small Molecule Inhibits Enterovirus 71 Replication via Allosteric Stabilization of a Ternary Complex
SM: UYS
Class III PreQ1 riboswitch mutant A52G
SM: PRF
Class III PreQ1 riboswitch mutant A84G
Structural descriptions of ligand interactions to DNA and RNA quadruplexes folded from the non-coding region of Pseudorabies virus
SM: V8A V8A
Crystal structure of the SAM-SAH riboswitch with SAH
SM: SAH SAH SAH SAH SAH SAH SAH SAH SAH
Crystal structure of the SAM-SAH riboswitch with SAM
SM: SAM SAM SAM SAM SAM SAM SAM SAM SAM
Crystal structure of the SAM-SAH riboswitch with AMP.
SM: AMP AMP AMP AMP AMP AMP AMP AMP AMP CBV CBV
Crystal structure of the SAM-SAH riboswitch with adenosine.
SM: ADN ADN ADN ADN ADN ADN ADN ADN ADN
Crystal structure of the SAM-SAH riboswitch with AMP
SM: MTA MTA MTA MTA MTA MTA MTA MTA MTA
Crystal structure of the SAM-SAH riboswitch with decarboxylated SAH
SM: AMP DSH DSH
Crystal structure of the SAM-SAH riboswitch with SAM from space group P312
SM: SAM SAM SAM
Crystal structure of the Pepper aptamer in complex with HBC, manganese soak
SM: J8F
Crystal structure of the Pepper aptamer in complex with HBC, cesium soak
Crystal structure of the Pepper aptamer in complex with HBC485
SM: J8L
Crystal structure of the Pepper aptamer in complex with HBC497
SM: J8O
Crystal structure of the Pepper aptamer in complex with HBC508
SM: J8R
Crystal structure of the Pepper aptamer in complex with HBC514
SM: J8U
RNA duplex with a cytosine bulge in complex with berberine
SM: BER
Crystal structure of the Pepper aptamer in complex with HBC525
SM: J8X
Crystal structure of the Pepper aptamer in complex with HBC620
SM: J93
NMR solution structures of CAG RNA-DB213 binding complex
SM: L94
Crystal Structure of the Domain1 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+)
SM: GTP NAD
Crystal Structure of the Domain1 of NAD+ Riboswitch with adenosine diphosphate (ADP)
SM: ADP GTP
Crystal Structure of the Domain1 of NAD+ Riboswitch with adenosine triphosphate (ATP)
SM: ATP GTP
Crystal Structure of the Domain1 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+), soaked in Mn2+
Crystal Structure of the Domain2 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+)
Crystal Structure of the Domain2 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+), soaked in Mn2+
Crystal structure of Squash RNA aptamer in complex with DFHBI-1T
SM: 2ZY
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Filter entries " Experimental resolution " between the two values. Global DB range: 0.6 – 11.2
Filter entries " Molecular weight (compound) " between the two values. Global DB range: 150 – 1000
Filter entries " Deposition date " between the two values. Global DB range: 1986 – 2027
Filter entries " Molecular weight (complex) " between the two values. Global DB range: 0 – 13090
Filter entries " Number of atoms " between the two values. Global DB range: 5 – 70
Filter entries " Number of interacting chains " between the two values. Global DB range: 1 – 4
Filter entries " Pocket size " between the two values. Global DB range: 15.9 – 394.0
Filter entries " SiteScore " between the two values. Global DB range: 0.3 – 1.3
Filter entries " Dscore " between the two values. Global DB range: -0.1 – 1.4
Filter entries " Exposure " between the two values. Global DB range: 0.1 – 1.0
Filter entries " Enclosure " between the two values. Global DB range: 0.3 – 1.0
Filter entries " Hydrophobicity " between the two values. Global DB range: 0.0 – 3.1
Filter entries " Hydrophilicity " between the two values. Global DB range: 0.2 – 2.8
Filter entries " Donor/Acceptor " between the two values. Global DB range: 0.0 – 5.0
Filter entries " Volume " between the two values. Global DB range: 21.2 – 1528.8