Complex 6t3k
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.44 |
| System mass | 132.10 kDa |
| Deposition year | 2019 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Oceanobacillus |
| RCSB PDB Entry | 6t3k |
| Reference | Manigrasso Jacopo, Chillón Isabel, Genna Vito, Vidossich Pietro, Somarowthu Srinivas, Pyle Anna Marie, De Vivo Marco, Marcia Marco. . Visualizing group II intron dynamics between the first and second steps of splicing Nature Communications |
| Compound | EPE |
| Residue | . / 448 |
| Chain | XA / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Compound | EPE |
| Residue | . / 444 |
| Chain | TA / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| Volume | 73.06 Å3 |
| Hydrophobicity | 0.088 |
| Hydrophilicity | 1.421 |
| Buriedness | 0.646 |
| Don/acc character | 1.181 |
| SiteScore | 0.591 |
| D Score | 0.385 |
| Compound | EPE |
| Residue | . / 445 |
| Chain | UA / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Compound | SPM |
| Residue | . / 449 |
| Chain | YA / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| Volume | 241.47 Å3 |
| Hydrophobicity | 0.020 |
| Hydrophilicity | 1.378 |
| Buriedness | 0.686 |
| Don/acc character | 0.727 |
| SiteScore | 0.693 |
| D Score | 0.518 |
| Compound | SPM |
| Residue | . / 450 |
| Chain | ZA / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| Volume | 239.76 Å3 |
| Hydrophobicity | 0.055 |
| Hydrophilicity | 1.272 |
| Buriedness | 0.673 |
| Don/acc character | 1.289 |
| SiteScore | 0.731 |
| D Score | 0.605 |